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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig26628  (registered. 2012)
Contig Information
Length 1312 bp
Clones alternative view 8 Clones [Download: TSV  ,  FASTA ]
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XV Leaves, plant was grown at constant 23℃ 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115462647|ref|NP_001054923.1|| Os05g0213500 [Oryza sativa (japonica cultivar-group)]
Score 373
Evalue 3.00E-101
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig26628
TTTTTTTTTTGACTACGGTGCTACAGAGATAAATTATCCATTTACTTCCATCTCAATAACAGCGAGGAGAACTCTTCCACCAATGTATATATTACAGCGC
CATTCCAAAATCTACAAGTCAAAATCCTCAACCCCAAGCGTTAGTGGAATGTTATCCAAGAACATAGTACAGTAGGCATCTAGTTGTCTCAAATGCACCA
AAGAGGCAAAACCACTCCATATGCTTCCCTGTTACATACACATACTAGGTATGCATACATAACCATGAGGTAGCTAGGTGCAGTTGCTAAGATCTAAAGC
ATCACTAGCTACTAGTACAAGTACACAAGTCTACATACTAATCCTTACGAGAGACATATATATGGAAGAAAATGGAGAATCTACCGGTCTGTAAAAGATA
GAAATTTCCTGCTAGCCTTTGAAGCTTCTTTCTTATTCATGCCGATTCACAAGTCCGTGCCCGTGAGGATGCTATTGTTCAAGCGGCGATGTAGGTGACT
GAACTGCTAGCCGCTCCGATACCTCAGCGAGAGATGTGAGGTTGCACTTGATCACGGCCTCAACGAAGTAGCAAGTCTCATCCTTTGTGTTGCCGTCGGG
CACATCAACCACGAAGGACTCGATCACAAGTGTCCCTGGCCGCCCATCAATACTCTGTGGGTGGACTGTTATGATGGATGAGTAGTTCCTGAGCCGGTGA
TCGCCTCCAACAAACTTGACACTGAGGATATGCTCGTCGTCATCCAGCTGCTCGAGCCTCTCGGTGCTAGTTGTGGCCGGCAGGCCGGTCTTGACGTTGA
CCTCCCGCACGCTGCCGATCTCGAGGTCGCCACCGCGCACCACGCAGCGGCTGACGAACGGCTTGTACCGCTGCGGCTGGTCGAAGCTCCGCACTAGCGA
CCAAACGAGGTGGACGGGGGCCTTGATATGCTTGACGAGAGCGGAGGTGCACTGGTTCTCGCCGGGCGCGTGGCCGTGCAGCCGCCGCATGTAGTCCGCC
TCCGTCGCCACCCCTCCTCCACCTGCGCCGTTAGCCGCCTCGTCGCTGAGCCTCCAGGCCCGCGCGCCGCCACCTACGAGGCCCACCATGACAGAAACTC
GGATACCCACCGCCGCCGCCGCCGCCGCTCCGACCGGTGGTTGGCCTGGCCTCCCCTCCTCTGCCGCCGGCTGTCTTTTTCTCCGCCTCTGCTGCTTGGG
GAATGGCTGGGTTGGGCTAATCGGTTTGGTGGGTTCCTTGCACGGGCGGGTACAAAAATCTGCGGGGTGAAGGGAGAGGCGGGCCCACCCACGAGTTATC
CATGCGCAGACC
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