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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig25850  (registered. 2012)
Contig Information
Length 1607 bp
Clones alternative view 93 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 2
Wh_h Spike at heading date 7
Wh_DPA20 Seed DPA20 6
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_PCDAM Anther at meiosis 9
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VHS Shoot with heat shock treatment 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 8
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 10
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XA Root 2
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1321999|emb|CAA66278.1|| thaumatin-like protein [Triticum aestivum]
Score 376
Evalue 5.00E-102
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig25850
TTTTTTTAAGTTTAGTATAATATTAATATAAAATTGAGTCANCTATTTTGAAATGGAGGGAGTATTTAATTTGAGGNNNCTGGTGCATAAATTAAATTAT
AAGCTATATAGTAGAAATGCGTACACTGCACGCACGGACAGCCTTATTTTCACGACACCGTCTTATATTCATCTTATGTAACAAACTTTATTCTTCACAC
TCATTGTATGTACGCGTATTATGCTGGTGGTGGTATCGTCCGCTACTAGCTACGATGATATCTTCTTCCTCATGGGCAGAAGGTAACCTGGTAGCTGTTG
TTGTTGCCGTTACAGGCGTGGTTCTTGGTGTCATCGGTCGGGAAGAGGTAGGCGTCGGGGCACTTGTCGGCCTGGCACACCAGGTTGGGCCCGTTGCTGC
AGGAGAATGACAACGGCAGGTTGAAGCCGTCTATGACAGAGATGTCGTAAAAGTCCTGGCCGTTGCCAATGGTGAACTCGGCCAGGGTCAGCGGCGGCTG
CCCGGACAGCGTGCACGACAGCGCGCCGCCGCAGTCCGCAGTCTGGCAGCTCCCGGAGTTGCCGTTGAAGTTGCAGCCCGTGCGGCCCCACACCCTGCCG
GAGGGCGTGTTCGCGGGGACGTCGAGGGTCCACGTCTCGCCGGTGTTGAGCTGCCGACCGCCGCCGATCGGGGTGGCCGCCGGCCACACCGTGTAGGGAC
AGTTGTTCTTGATGTTGAACGTCGCCGCGTTCGTGCTGGCAGCGAACACGGCAAGGAAGAGGACCATGGAGGCAGCTGCTGCCAGGTGGGACGAAGCCAT
TTCAAGTTGCTTTGCTTCTGTGTCGTCTACACGTGGTTTGGGTTCTGTTCAAAAACCTCGTACGAGAACTTGTATAGAGAAGGATTTCCCGCGGCGCAGC
AGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGACCCAGCCCAGTCCTCTCGTACTAGGGCTGGCT
CCTCGCAGTTCTCCCTTTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTCATCGGCGAACAACCG
AACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTGGGAGTCATCAGCCTGTTAT
CCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACA
GTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCAACGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCATCCGCCCCAGATAA
ACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTGTGTGT
CACCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAGGTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCA
TCTTCAC
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