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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2567  (registered. 2012)
Contig Information
Length 2231 bp
Clones alternative view 257 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 4
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 3
Wh_oh Pistil at heading date 1
Wh_r Root 8
Wh_SH - 4
Wh_CSEC Callus 1
Wh_EM Dormant seed with water absorption 2
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 8
Wh_MS Seed DPA5 of DT3DL CS wheat 8
Wh_OKCS Seed DPA5 1
Wh_RDr Root of dessiccated seed 8
Wh_SHC Shoot grown with cold treatment 7
Wh_SHDr Shoot grown with dessication 3
Wh_V4816 Shoot grown under cold condition for 16days 13
Wh_V483 Shoot grown under cold condition for 3days 13
Wh_VABA Shoot with ABA treatment 12
Wh_VHS Shoot with heat shock treatment 5
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 23
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 6
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 7
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_SP 7
WH_XA Root 5
WH_XB Root 9
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 9
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 28
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|68655495|emb|CAJ01713.1|| methionine synthase 1 enzyme [Hordeum vulgare subsp. vulgare]
Score 1251
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2567
GAACAATGTGAGACTAAGATTTTTTTTTTGGAGAAATTTTGTAATTTGAAACATAACGTAACAAACTCAGACTTAGATGAACAATTCGCCACTCAGTTTA
CAATACACACCGACAACCGCCTCAAAAACCACCAAATCAAGGGATGAGCACATCGCGCCGCACCGAGAAACAAACTAGCCTAACCAACAAGTGGATACGA
GACCCAGATTATTCAAAAGTAAACACGGCTATGGTGGTGACATCCTCCTTGCAATTAAAAGTGGGGAGCTGCTATACAAGCACGGCTTACTGCGCCTTGG
CGAGCTCGGCGCGGATCTGCTTGGCGGCCTCAACCATGTTGGTGAGCGCAGGCTTGACCTCGGCGTACTTGCGGGTCTTGAGACCGCAGTCAGGGTTCAC
CCACAGGATGTTGGTGTCGAGCACCGCGAGCATCTTGTTGACACGGTCGGCAATCTCCTCCTTGGACGGGATCCTGGGGGAGTGGATGTCGTACACACCC
GGGCCAATGCCTGCACCGTACACCACACCCTCGCGGAAGACGGAGAGAAGCTTCTCGTCAGACCGCGAGTTCTCAATGGTGATCACATCAGCGTCCATGT
TGATGATGGACTGGATGATGTCGTTGAAGTTGGAGTAGCACATGTGGGTGTGGATCTGGGTGGTGTCCTGGACACCGCAGTTGGTGATCCTGAAGGAGTG
CACGGCCCAGTCCAAGTAGAAAGCGTGCTCAGACTTGCGGAGTGGCAGACCCTCTCTCAAAGCAGCCTCGTCAATTTGGATGACCTGAATACCGCCTGCC
TCAAGATCCTCAACCTCCTTCTTGATTGCAAGAGCAATCTGGTAGCAAGTCTCAAACCTCGGTTGGTCATTTCTGACAAAAGACCAGTTAAGGATTGTGA
CAGGGCCTGTCAACATTCCCTTCATTGGGCGAGCAGTCATGCTCTGTGCCATCTTGGACCAGAACACAGTCATGGGGTTGGGGCGGCTCACGTCACCATA
GATAATCGGTGGCTTGACGCACCTGGATCCATAAGATTGCACCCAGCCATTGGCAGTGAATGTGAAACCAGAGAGCTGCTCACCGAAGTACTCAACCATA
TCGTTCCTCTCTGGCTCTCCGTGCACAAGCACATCAATGTCAAGCTCTTCTTGGATCTTAACAACCTTGCTAATTTCCTCCTTGATGGCGTTGGTGTACT
CCTCCTCAGAGATCTTCTTTGCCTTGTACTCACGGCGAACTCTCCTGAGCTCCACGGTCTGTGGGAATGATCCAATGGTGGTCGTGGGAAGGACCGGAAG
GTTGAGCTTCTTCTGCTGCGCATCCAACCTAGCGCTAACGGTGGTAGCACGGCGGTGATCAGAGCCCTTGAGAGCAGTAGCAGCCTTCTGGACCTCCTCA
TTTGTGACACGTGGTGACGACCTTCTTGAGGCCAGAGCAGCAGCATTTGCTGCGAAGTAAGCCTCATCCTTTTGACCAGCCAATGCCTTGGCAAGGGCGT
TCACCTCAACGACCTTTTGGGCGGCAAATGCGAGCCATGACTTAATCTCATCATCAAGCTTGGTCTCATTTACAAGGTCCACAGCAGTGTGCATGAGTGA
GCACGAAGTCGATACGACAAGCTTGTCCTTCCCAACAACAGCCTCGAGAGACTGAAGAGTGGCGAGAGATGCAGCAAGGTCATCAGCCCAAATGTTGCGT
CCATCTACGACACCAGCAAAGAGGTACTTTCCAGCGGGGAAACCACTCTTGACAAGCTCAAGAGTCTTGGTTCCACGTTCAAGGTCAAAACCATAAGCAG
TCACACTGCTCAATGATGTAAGAATCTTGTATGAGTCTGCAGGGACGTCAGCGAAGTAGGTCTCAACAAGAACGTTCAATCCAGAAAGTGCCGACTCAAG
TTCTGAGTAAGCTGCAGAGAATGCAGACAGTTGGTGGGATTCAAGATCCTTAACAAGGGTGGGCTCATCAAACTGAATCCATGAAGCGCCAGCTGCCTTC
AGCTGAGCAATAACCTCCTTGTAGACGGGAAGGATGCTGCTAAGAAGGGAAAGGGGAGAGAATGATTTCTCTACACCCTTGGCGGCCTTTGAGAGCAACA
AGTATGAGACTGGTCCGACAAGTACTGGGACGGTATCAACGCCAAGCGCCTTAGCCTCCTTGTACTCATTGATAGCCTTGTGAGAAGAGTAGGAGAACTT
GGTGCTAGGAGCCAATTCAGGGACGATAAAG
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