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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig25180  (registered. 2012)
Contig Information
Length 857 bp
Clones alternative view 25 Clones [Download: TSV  ,  FASTA ]
Wh_VWD Shoot grown with dessication 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|125587887|gb|EAZ28551.1|| hypothetical protein OsJ_12536 [Oryza sativa Japonica Group]
Score 351
Evalue 7.00E-95
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig25180 
AAAACACTAGCTGCAAGCTAGTAACATGATACAAAAGACAAAACAAACTAAGCCTTCACTGAACTTTATTTATCGAGACATATATAGGGTGGCTGATAAA
CCTCTACCACCAGGTGGTGGCATCAGAGTTTGTTCGAGTATCGGTAAACTTACAGCAGTATCATTACCCATCAGACAGTACATTTATTGAAACAGCATTG
TCTAGAGCGTCGTAAACTGCTCAAAAATAAAATGCAGATGCAGTGCGGTGTCTCAGCGATTCAGTGTCAAGATTGGCAGTTTACAACAAGGGTCATCAAG
CTAGTAGTGGTTAGACCAATCAGCAGCACTACCGACGCGAGGGATCCCCGAGTCCTTCTTGGCCTCGCTGTCGACCTTGAAGGTGGAGCCGCACATCTGG
CCCTGGCTGTCCACACGTGGCACGGCCTTCAGCTCGTTCAGCGGGTGCTCGAAGCTCTGCAGCCCTCCAGATGTGGTGTAGAAGCAGCCTTTGGGGAATG
GCGCAAATGAGTTTCCACAGCCTGCCTTGAGAAGCTCATTGTCGTCAGAGAACACAAGGTGGTCTTCAGAGTCGACGCCCCAGAAGAAGGGGATACTGCC
ATCAGCATCAGCAGCGACGAAGGTGGATTTCGACACGGTGTCGTACAGGATGAAAGCGAACCTTCCACTGAGATCTCTCACGACCTGGCTGGCTGGGAGC
GGGCCCCTGTCCCGGAGGGTTCTGTAGGCCTCAATCAGGATGGTAACCTCATTTGCTGTCTTGCTCAGACCATAGTGTTGCTTCAGGTTGCCAATGTTCT
CAACATGCCCTTGGAACAGGCAAAATATGTCGTTCACAGAACCAAACATCCTGGGGA
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