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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig23388  (registered. 2012)
Contig Information
Length 1831 bp
Clones alternative view 83 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 8
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 4
Wh_oh Pistil at heading date 3
Wh_r Root 1
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 4
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 8
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 7
Wh_VSCB Liquid cultured tissue 4
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 4
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23Ž 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115446385|ref|NP_001046972.1|| Os02g0519900 [Oryza sativa (japonica cultivar-group)]
Score 1059
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig23388
TTGATAGACATCAAAAGTATCGCGACAGATATATAATCTAAGTTTTAACATCGACAGACATCAAAACAAAGTGCCAGTATCACGACAGATAGGAGTACAT
TCCAATAGCAATACAGCGACGACGACTCAATAGACAGATAATAGTGCAGCTCTCTTAGCAGCAAAAGCAAACTAGACCATGTAACAGAAGCAAAAGTTTA
GAGCTTGTCCTCGAAATCAGATAGAGGGGTCATCTGTTCCTTGAGACCCTTGCGCTTGCGGATCTCTGTGACAAGGGTCGCGGACTGGGAGCCGGCCTCC
AAAGGATCAGAAGACATGATGTCCCAATGGTCGAACACACACTGGGGGAAAGCCTGGCCAGATGTCGCCGCCCTGAGGGTACTTGAGAACCCAAACGACT
CGATGACCGGGAGGTAAGCCTTGATGTTGTACAGCGGGGTACCAGGCCTCTGCATCTCCTCAAACACGTGCCCTCTCTTCTGATTCAGAACACCATAGAT
ACCGCCAAGTGCATTCTCCGGGGCCTGGATCTCAACCAGGTACACAGGCTCCAGCAGCCTTGGCTTGGCAGTGAGCTGAGAAGCGTAAATGACCCTCCTG
GCTGTTGGGATGACCTGACCACCACCCCTGTGAATAGCATCAGTGTGCAGAACAACATCACAGACCTCAAAGCAAATGCCACGCATGTTCTCCTCAGCCA
GAGCACCTTCTTTCGATGCCCATTGGAACCCAGCCACAACAGAGTCCTTGATTTCATTCAGATACTGCACTCCCTTACACATGTCAACAACCATGTTGGG
GCCAGTCGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCGAGATCCTTGTCCCACCCAAACTCCTCAGACAGGATCTTGGAGCGAACCTTAGGATCATCA
CGCGGGCCAATGCGGCCATCATCAATAGCCTCAGCCAATCCCTCCTCCAATGGGCGAGCTTCCATGTAAAGACGGTTATGCTTGTTGGGGGACTTGCTCA
TGACAGTGCGACAGGACTTCTCAAGAACAGTCTCACGGAAGGAGACGACGGGAGGGGAAACAATAATTTCAGCACCACCCATGAAGTCCTCCTGCAGATC
CTTCAAACAGATTTCAAGGTGAAGCTCTCCAGCTCCAGCAATGATATGCTCACCAGACTCTTCAATGCTACAGAGAACCATAGGGTCAGACTTCGCCAGC
CGCTTCAAACCCTCAACAAGCTTAGGAAGATCAGATGCCACCTTGCACTGAACGGCAACACGCACAACAGGGGACACAGAGAACTTCATTGCCCTGATTG
GGCAGGCATCAACTTCCTTCTCATTTGTCAGGGTTGCATTCTTGGTGATGAACTGATCCAAACCAACCAAAGCAACAGTGTTACCACAGGGAACATCCTC
AACAGACTCTTGCTTCTTTCCCATCCAGATAACAGTACGCTGGACACTCTTCACATACAGATCCTTCTTCTGGCCAGGAACAAAGTTGGGACCCATGATA
CGGACCTTCATACCAGTTGCAACCCTCCCGGCAAAAACACGTCCAAAGGCAAAGAACCTACCCTTGTCAGATGCTGGAATCATCTTGGAGACATACAGCA
TAAGAGGACCATCAGGGTCACAGTTTCTGATAGCATTAGCATATATATCATCAAGGGGACCCTCGTACAAGTTCTCCACACGATACCTCTGTGCCTTTGA
GGGAGAGGGAAGGTGAAATATCATCATCTCAAGCAGAGCACGACTGGCAGGCAGCCAAGTTTGCATCACACGCTTCATGAGAGCCTTGCCCATCAAGTCC
TTCTCATCATTCTTCATCGTCACACCAAGCT
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