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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig22648  (registered. 2012)
Contig Information
Length 1237 bp
Clones alternative view 90 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_r Root 1
Wh_CSEC Callus 4
Wh_DPA20 Seed DPA20 2
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_V483 Shoot grown under cold condition for 3days 6
Wh_VHS Shoot with heat shock treatment 1
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 6
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 13
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 5
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 6
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23Ž 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|162458481|ref|NP_001105561.1|| cytochrome b-c1 complex subunit Rieske, mitochondrial precursor"
Score 496
Evalue 2.00E-138
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig22648
TTTTTTTTTTGAAGAATAGTATGTTTGCTTATTTATCAAATATATAGGGAGCAAGGACCAGAAGAGGTATACAATATCCTTCCGATAGGGTCTCAGAAAA
TCAGTATAAAACAACTTACAATCCAGTAGCAACATAGGAGAAACAATTATTTCGCACTGCAAATGAACTTCAGTAGGTAACAGTGGATCACCGTTGCGAT
AGTCCTGAAACAAAAACTCCTAGCCACATTGAAAACAAAATAACAGCGCAACAGGAATTCACTCCTGTCGAGAATATATGTCGGTAGGTACTGGTTTTAG
GCTCTTAGCCTATGAGCATCTTGTTATCTTCCAAGAAACTGTAGGTGGGCACCTCAAGGTTGTACGGGGCAGGGCCCTTGCGGATTCTGCCAGAGATGTC
ATAGTGGGAGCCATGGCACGGGCAGAACCAGCCACCAAAGTCTCCAGAGTTGGGAAGGGGAATGCAACCAAGATGAGTGCAGACCCCAATAACAACCAGC
CACTCTGGGTTCTTCACACGCTCAGCGTCTTGCTCTGGGTGGCGCAAGGATGCAACATCCACGCTGTTGGCCAGCTTGATGTCATCATCTGTCCGTCGCC
TGATGAAGACTGGCTTTCCACGCCACTTGACAGTCACTGTGCTGCCGGGTTCAATGCTGGATAGATCAACCTCAAGGGAAGCAAGTGCAAGCACATCCTT
ACTTGCTGACATGCTCAAGACAAACTTCAAGACAAGGAGACGCAGCAGTGATGCATATACGAATCTCCCACCACTCAGAACAAAGTAGGCAAAGGCACGC
TTGCTGGGATCTCCAGGAGGATATCTTTCATGGTTGTACTGGTCATAAAGGATTTTTGAGTTGGGGTTCTTCAGTGCAGCAACAGTGGCTGGGAGTTCAG
CCAACCCAGCATCTTGGTTCCGTGGAACAAGTGTTTCAGCCGAAGAAAAGCCTCTCGCGGCGGTGAAGAAGGGGGACTCGATGGCGAACCGCCGCTGGTA
GGCCGAACCGTCGTCGTCGTCTCTCCCAGGGCCGCCGGCGCCGGCGAGCGGGCCCCTGGCTCCGACGGTCGCCACGGGGCGCCAGGAGAGCGAAGACGAG
AGCCTCCTCCCCGCAACCCTCAGCATCTCGTCGGCGTCGTCCTCGTCCTCCTCCGCTAGATTGGGGATGGTAGTCTAATCTCGGCTAGGGTTCGCTCGGT
GGCCACACGGAATGGAGAGGCTAGAGAGAGAGAGGGG
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