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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2173  (registered. 2012)
Contig Information
Length 2049 bp
Clones alternative view 188 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 4
Wh_r Root 3
Wh_SH - 2
Wh_CSEC Callus 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 8
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 3
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 5
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 8
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 6
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 9
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_SP 5
WH_XA Root 7
WH_XB Root 13
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XE Seedling, infected with leaf rust 19
WH_XF Seedling, infected with leaf rust 5
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 17
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115438939|ref|NP_001043749.1|| Os01g0654500 [Oryza sativa (japonica cultivar-group)]
Score 794
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2173
TCGACTTGTTTAAAAAAAACGCTGGCAGCCAGAACTCTTTTCTAGTAAGTAGCAGGATTTTTCCTGCTCTCCTAAAAAAAGGGCAAACTACCAAGCAAAT
TAAACGAGCAAACTATGCATCTCCATTCAAATGTAGAATCTGCTGGTTAGACATGACACAATTATCAGATGTGAATAATGGTTCTATATGTCCTTTATTG
TGAGCCCCACTTACATAACATCAGCATCTACAGAATCGCTTGCATGTTTGACAATAATATGCGATGGTGCAGTAAAAGCTCGTTCTGTTCACAATGAAAG
CATGACAGGTAATGGCGACATAACCAAAATGACTTGAATCGATGAGTAATGACTATTCAAGCATTGAAGTGGAAGAGGTCTTTCACAGTCTTGATTTGAG
CTCAGCAGCAACAGCGTCAATGAACTCTTCAGTGTTCAGGTAATCGCTTCTTGTAACTTTTGAGGATCCATGGACAAGGAGTGCAAGGTCCTTGGTCATC
TTCCCAGACTCCACAGTTCCGACGCACGCTTCCTCAAGTTTCTGTGCAAATTCAAGAAGTCTAGCATTCTCGTCTAGCTTTGCCCTGTGTGCAAGTCCTC
TTGTCCAAGCAAAGATTGAAGCAATGCTGTTTGTGCTGGTTTCACCACCTTTCTGGTGAACACGGAAATGGCGGGTAACTGTGCCATGGGCAGCTTCAGC
TTCGATGGTTTTACCATCAGGGCACATCAATACTGACGTCATCAAGCCCAAAGAGCCAAAACCTTGAGCTAAGAAATCACTCTGCACATCTCCGTCATAG
TTCTTGCAAGCCCAAACATAGCCTCCTTCGCTCTTAAGTGCATAGGCAACCATGTCATCGATGAGACGATGTTCATACCATATTCCAGCAGCCTCATATT
TGGATTTCCAGCCAGCTTCATAGATCTCCTGGAAAATGTCCTTGAACCTGCCATCATATTTCTTAAGGATTGTGTTTTTTGTGCTAAGGTACAATGGCCA
TTTCTTCTCATAAGCGATTGCCATAGAAGCTTCAGCAAAACCTCGAATTGACTCATCTGTGTTGTACATAGCCATGGCGACTCCTCCAGCACCAGTGAAG
TTAAAAACCTCAAGGTCAACCGTCTCGTCTTTTCCCTCGAAAACTAGTCTGAGTTTGCCAGGTCCCTTGAGAACGGCATCAGTTGCTCTGTACTGATCAC
CGAAAGCATGCCTTCCAATGCAGATGGGCTTAGTCCATCCTGGAACAAGCTTTGGGACATTCTTGCATATAATTGGCTCTCTGAACACGGTGCCATTTAT
AATGTTCCTAATTGTGCCATTTGGGCTCCTCCACATTTGTTTTAGGTTGAACTCCTTAACCCGATCTTCATCTGGAGTAATGGTTGCACATTTAATAGCC
ACATTGTACTTGAGAGTAGCCTCTGCAGCCTCCACTGTAACCTTGTCATCAGTTGCATCACGGTGTAGAACTCCCAAGTCAAAGTACTTAATGTCCAAGT
CCAAAAATGGGAAGATAAGCTTGTCCTTGATAGACTGCCAGAATACTCTGGTCATCTCATCGCCGTCCATCTCGACGATAGGGTTGGCGACCTTGATCTT
CTCGAACGCCATGGCGGCCGCGGCGGACGCTGATTGCCTCGGAGGTCGGGAGCGGGTCGGGGCAGGTTGGTGGGGTAGGCGGCGGCTGTGGTGACCCTCG
TGCCGAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGCTGGTGTGCTCTCCGGCTATGATCAGCTCCAGATCCTCTTCTTCGGCAAGAAGTACG
GCTCAGGCGGTGCCTAGACGGGAAGAAATGATGACGAACAAGAGAAGTCTGTTCCCAGTCCTGCCCTTCGAGGATCTGGCGAACTTTTATCTTTTTAACG
TTGGAAGGCAATAATTTCTGTAGAGGGTGGATTTTCCCAACATTCGTTTTTGGTGGAGGCATCGAACTCCAGAGGTTGTCGTAGGTTGGCGGCAGCGTTC
TCAAAACATTTACTATCATAGGGGTTGAGTTTGAGTCCGAGTATGTGCC
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