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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig20666  (registered. 2012)
Contig Information
Length 773 bp
Clones alternative view 396 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 15
Wh_h Spike at heading date 6
Wh_r Root 1
Wh_SH - 20
Wh_KMP Shoot grown under continuous light 11
Wh_KMV Shoot grown with continuous light after cold treatment 5
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 3
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 34
Wh_VABA Shoot with ABA treatment 10
Wh_VHS Shoot with heat shock treatment 41
Wh_VWD Shoot grown with dessication 12
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 23
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 12
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XN Leaves, plant was grown at constant 23Ž 23
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 13
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 35
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 37
WH_SP 2
WH_XE Seedling, infected with leaf rust 13
WH_XF Seedling, infected with leaf rust 22
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 26
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23Ž 6
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|11990895|dbj|BAB19811.1|| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit"
Score 357
Evalue 6.00E-97
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig20666
TTTTTTTTTTAGCAGCGGAGCCCCGAGCCCCTCTCGACTTCAGTATAGATTTTTCGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAA
CACAGATCATATGGAACGAGAAATATGCTCTGGTCGGAAAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAATGACCATCATACATAGGCCATTGTTTCA
ACTTGTAGTTTAGGCCTTGCCGGACTCCTCGCAACCTGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACA
CGGACATAGGCATCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGCGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCC
AGTATCGACCGTCGTAGTACCCGGGAGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAG
GTAGTCTACCTGCTTTAGGAGGGCCTCTGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATACCCTCAATCGGCCACACCTGCATGCAC
CTGATCCTTCCGCCATTGCTGACGCGGCCGAGGCTGCCGCTGGAGCGGCGGCTGACGGGCAGACCGGCTGTGGACTTGAGCCCCTGGAAGGGTGCGACGG
TGGTAGCCGACGAAGCCATCACGGCGGGGGCCATGGTATTGTATTATCGGAGGAGAGGAGGATGCCCTCGTGC
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