Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2041  (registered. 2012)
Contig Information
Length 1558 bp
Clones alternative view 65 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 4
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 3
Wh_r Root 4
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_SHC Shoot grown with cold treatment 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VABA Shoot with ABA treatment 2
Wh_VSCB Liquid cultured tissue 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_SP 7
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|74048999|gb|AAZ95171.1|| eukaryotic translation initiation factor 5A1 [Triticum aestivum]
Score 330
Evalue 4.00E-88
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2041
AAATCCGCCAACATAGCATTAACCCAGATAAGACAACCCAAATGATGACNNNAAATCCTAAACTACTCTTCTCCCACTACAATAAACCAGAAAATGCAGA
AGAGTCATTTTTTTTTTAACCCAAACCAATTCATTCATAGAGATAGGGCGGATGAGCAAACCGGAATCTAAGTTCCAGCCACCACTCAGTTCCAATTCCA
AAGGGTATTATAATAGAGATAGATAGATAGATAACAAAGTACTAGCAGCACCTCGAGCATTCGGTGTAAAGAACACACAAATCTGGATCAAACTTGTTTC
ACCCAACAGATATCTTGATGCCTATGTATGTGTATCTCAAACACCCAGAAGCACTAGATACCAAGTATCGCAGGTAGGCAACCACGCACAGCTGCTTACT
TGCCACCACCGATTTCCTTCACAGCGCAGATCTGTTCTTCACCCATGGCGGACATCACAGACAGGATCAGGTCCTTGCCATCAGCAAATCCAGTCTTGAT
CTGGCCAAGCAGAACATCATCAGTGGGAAGCTTCAGGTCATCCTTCGTGTTGCCACTCTCAGTTAGAAGGCTGACATATCCATCATCAGTTATGTCAATC
AGCTGATAATCTTGGCGGTCAACATGGGGGACGTCACAGTTGTGGGATGAAGGAACGATATCCTCAAGCTTCTTTCCATTAAAGATGTCAATGGCAACAA
AGTGACACTTTGCGTGACCATGCTTCCCAGTCTTGGAGGTGGAGACCTCAACAACCTTGCAGGGACGGGCCTTGATGACGATGTGTCCACCCTTGCGGAT
GGCGCCGGCCTGCTGCGGGTAGGTCTTGGAGGCGCCGGAGTCGGCCTTGGACTCGAAGTGGTGCTCATCGGTGTCCGACATCTCCGACGATCCTCCTGAG
TCCGGGGGCAAGAGGGGTGCCCTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGC
GCAACCCTCGTGTTTAGTTGCCACTATGAGTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGATGAGGCCAAGTCATCATGCCC
CTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGACAAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG
CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATCCGTTCCCGGGCCTTGTACACACCGCCCGTCA
CACTATAGGAGCTGGCCATGTTTGAAGTCATTACCCTTAGTTGACACTCATCTTAGCTTTCCAATGGCGGCAGCCACCATGTCCCTCTCCTCCTCGACCT
TTGCCGGCAAGGTGGTGACGAACGTTCCATCTTTGGCTCTCTTTGGCGAGGCCCGAGTCACCATGCGCAAGACCGCAACGANNNTGAAGCAGGTTTCTTC
TGGCAGCCCATGGTACGGTGCTGANNGTGTGCTCTGCCTCGGCCCACTCTCCGGTGAG
page-top