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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig20205  (registered. 2012)
Contig Information
Length 702 bp
Clones alternative view 156 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 8
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 2
Wh_r Root 2
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 6
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 7
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 3
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 6
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 5
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 11
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_SP 4
WH_XA Root 6
WH_XB Root 7
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 8
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|255674591|dbj|BAH92201.1|| Os03g0417800 [Oryza sativa Japonica Group]
Score 168
Evalue 4.00E-40
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig20205
CCGGGCCCACCACTTCGAGCGCCTCCTCCTGTCTCGTCCTCGTCCCCCGTCCCCTCGTCGGCGCCCGATCTAAGTCAAGATGAGTCGTGGCGGGAGTGCT
GGTGGTGGTCAAAGTTCTCTGGGTTACCTGTTTGGAGATGGCGAGCCTGCAAAGCCTGCTGCAGCACCAGCTGCGAAGCCCGCACCTGCTGAGAAACCAG
CACCGGCAGCTGCTGATGTAGCCAAGCAGATTCCAGCTGGCATTCCAGGTAGCCGGGCGAACAACTATTACCGTGCAGATGGCCAGAACACGGGCAACTT
CCTTACGGACCGTCCTTCAACCAAGGTTCATGCTGCTCCTGGCGGTGGCTCGTCCCTGGGCTACTTGTTTGGCGGAAAGTGATGTTAATGATGGTGCCTG
CTTAATGAACGAGCGATGAATTGGCCTGTATCTCTGTTATCCATGTGGTGAAAACTGGAAGTGTTTGGTTTGAGCAGTTTACCACCTGCGTCGATGTACT
CTGTCTGTATGGTTCATTGTGTCCAAGCTGACCTCCTGCTTGGAAGCCAGCTTGCCTAAAACCTGTCGCTTTCAAACTAATCGTCTTCATCTCAAAACTT
GGTGTGCCTAATTCATTGTTTGCGTCCCCTTGCTGTGTCAAACCTGTTTTTTCTGTTTTTAGCATACCCAACTCTATGTTTCGCTGAACTCATTGATAAC
AT
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