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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig19741  (registered. 2012)
Contig Information
Length 1985 bp
Clones alternative view 65 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 2
Wh_CSEC Callus 1
Wh_EM Dormant seed with water absorption 1
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_OKCS Seed DPA5 1
Wh_RDr Root of dessiccated seed 3
Wh_SHDr Shoot grown with dessication 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 6
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 13
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|50400847|sp|P83970.1|PMA1_WHEAT|PMA1_WHEAT RecName: Full=Plasma membrane ATPase; AltName: Full=Proton pump
Score 1068
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig19741
GAGGACTGCTCTGACTTACATCGATGCTGAGGGTAACTGGCACCGTGCCAGCAAGGGTGCTCCTGAGCAGATTATTACCCTGTGCAACTGCAAGGAGGAT
GTGAAGAGAAAGGTGCACTCTGTGATTGAGAAGTACGCTGAGCGTGGGCTTCGTTCGCTTGCTGTTGCAAGACAGGAAGTACCCGAGAAATCCAAGGATT
CTCCTGGTGGACCATGGCAATTCATTGGTCTGTTGCCCCTGTTTGATCCCCCAAGGCATGACAGTGCTGAGACCATCCGCAAGGCACTTGTTCTTGGTGT
CAACGTCAAGATGATCACAGGTGACCAACTTGCTATTGGAAAGGAGACTGGTAGGAGGCTTGGGATGGGCACAAACATGTATCCTTCTTCTGCATTGCTT
GGCCAAAGCAAGGATGGTTCACTTGAGTCACTTCCTGTTGATGAGCTGATTGAGAAGGCTGATGGATTTGCCGGAGTCTTCCCTGAGCACAAGTATGAGA
TTGTGAAGAGGCTGCAAGAGAAGAAGCACATCGTTGGTATGACTGGAGATGGTGTCAATGATGCTCCTGCTCTTAAGAAGGCCGACATTGGTATTGCTGT
CGATGATGCTACAGATGCTGCTCGAAGTGCTTCCGACATTGTGCTTACCGAGCCAGGTCTCAGTGTCATTATCAGTGCTGTCCTGACCAGCAGGTGCATT
TTCCAGAGGATGAAGAACTACACGATCTATGCAGTTTCCATCACCATCCGTATTGTGCTTGGCTTTATGCTTATTGCCTTGATCTGGAAATTTGATTTCG
CCCCCTTCATGGTCCTTATCATTGCCATCCTCAATGATGGTACTATCATGACAATATCCAAGGACAGAGTTAAGCCATCTCCCTTGCCCGACAGCTGGAA
GCTCAATGAAATCTTCGCCACTGGTGTTGTGCTCGGAACCTACCTTGCCCTGATGACTGTCGTCTTCTTCTGGGTTATCCACAAGACAGACTTCTTCACA
AACAAATTCGGTGTCAGGTCAATCAGGGACAGCGAGTTTGAGATGATGTCTGCACTGTACCTCCAAGTCAGTATTGTGAGCCAGGCTCTTATATTCGTGA
CTCGTTCACGTAGCTGGTCCTTTGTTGAGCGCCCTGGTTTCCTCTTGGTTACCGCCTTCCTTCTTGCACAATTGGTTGCAACACTCATCGCTGTCTATGC
CAACTGGGAGTTTGCAAGGATCAAGGGAATCGGGTGGGGCTGGGCTGGTGTTATCTGGCTCTTCAGCATTGTGTTCTACTTCCCACTTGACATTTTCAAG
TTCTTCATCCGATTTGTGCTGAGTGGAAGGGCCTGGGACAACCTCCTGCAGAACAAGACTGCTTTCACCACCAAAGAGAACTACGGCAAAGGGGAGAGGG
AAGCACAATGGGCTACTGCACAGAGAACACTCCATGGCCTTCAAGCACCCGAGCCGGCCTCCCACACACTGTTCAACGACAAGAGCAGCTACCGTGAGCT
CTCTGAGATCGCTGAGCAAGCAAAGAGAAGAGCTGAGATTGCAAGGTTGAGGGAGCTCAACACACTCAAGGGCCACGTTGAATCCGTGGTGAAGCTCAAG
GGCCTTGACATCGACACCATCAACCAGAACTACACCGTGTGAGGAAATTCGACATTGAACCAACAAACATGACATCCGTATTGGAGCGAGATTGGAATGG
AGCTCCGCTTTAAGATTTTTCCGGTGAATGAATGAAACAAACATGGCTGATCTGACCAGCCCCTAGTTGTAAAGTGCTACCAAATATATGGTTTCGGTTG
TCCGTCTTCTAGAGAGGTTTTAATGTTCTAGTGGAGTTATACCGTGTTTGGAGCACGGCGTGGTTGTAATCGTTTTCGCGTTTTACCCAGTTTCCCCTAA
CTAGTCGGTGATCTTGCGGAAGCAAGACGAGAAATAATCACTGCAAATTTTCTGCCCCATGCTTGCTATCCCTTCACTTGGGTTT
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