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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1956  (registered. 2012)
Contig Information
Length 1866 bp
Clones alternative view 115 Clones [Download: TSV  ,  FASTA ]
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 3
Wh_h Spike at heading date 6
Wh_r Root 6
Wh_yd Spikelet at late flowering 5
Wh_CSEC Callus 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 6
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 6
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 5
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 3
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_CA 1
WH_SP 13
WH_XA Root 3
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XF Seedling, infected with leaf rust 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|8928432|sp|Q9ZRR5.1|TBA3_HORVU|TBA3_HORVU RecName: Full=Tubulin alpha-3 chain
Score 920
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1956
AATTCGGCACGAGGCCGGCGTCTTCGTACTCGCCTCTCTCTCGCGCTTCCGAGCTTTGTCCTTCGTCCTCCTCCCCCGACCTCTCCAGCAGCGTAGCGTA
GCGCCCGCTTCCGCCGTTCCGACCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCTGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTC
TACTGCCTCGAGCATGGCATTCAGCCTGATGGACAGATGCCCGGTGACAAGACTGTTGGGGGAGGTGATGATGCTTTCAACACCTTCTTCAGTGAGACTG
GTGCTGGGAAGCATGTCCCCCGTGCTGTCTTTGTTGATCTTGAGCCCACTGTGATTGATGAGGTGAGGACTGGCACTTATCGCCAGCTCTTCCACCCTGA
GCAGCTTATCAGTGGCAAGGAGGATGCAGCCAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGACCTATGCCTGGACCGTATCAGG
AAGCTTGCAGACAACTGCACTGGTCTTCAGGGATTCCTCGTCTTCAATGCTGTTGGAGGTGGAACTGGCTCTGGCCTTGGTTCTCTTCTCCTGGAGCGGC
TCTCTGTTGACTATGGAAAGAAGTCCAAGCTTGGGTTCACAGTGTACCCATCCCCTCAGGTCTCCACCTCTGTTGTCGAGCCATACAACAGTGTCCTGTC
CACCCACTCTCTCCTTGAGCACACTGATGTGGCTGTCCTCCTTGACAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACA
TACACCAACCTCAACAGGCTCGTTTCTCAGGTCATCTCATCCCTGACTGCTTCCCTGAGGTTTGATGGTGCTCTGAATGTTGATGTCAACGAGTTCCAGA
CCAACCTGGTGCCCTACCCAAGAATCCACTTCATGCTTTCCTCCTACGCCCCAGTGATCTCAGCCGAGAAGGCTTACCATGAGCAGCTCTCTGTTGCCGA
GATCACCAACAGCGCCTTCGAGCCTTCCTCCATGATGGCAAAGTGTGACCCCCGCCACGGCAAGTACATGGCCTGCTGCCTCATGTACCGTGGTGATGTT
GTGCCCAAGGATGTCAACGCCGCTGTGGCCACCATCAAGACGAAGCGCACCATCCAGTTTGTGGACTGGTGCCCCACTGGTTTCAAGTGTGGTATCAACT
ACCAGCCACCCAGCGTCGTCCCAGGCGGCGACCTTGCCAAGGTCCAGAGGGCCGTCTGCATGATCTCCAACTCCACCAGCGTTGTCGAGGTCTTCTCCCG
CATCGACCACAAGTTCGACCTGATGTACGCCAAGCGTGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGAGAGTTCTCTGAGGCCCGTGAG
GATCTCGCTGCCCTGGAGAAGGACTATGAAGAAGTTGGTGCTGAGTTCGACGAGGGTGAGGATGGTGATGAGGGTGATGAGTACTAGAGCAGCTGAGATT
GCGACCTGATGATCTGCCCGAGTGGCTTTATCTGTTTTCTGTCTGTTTGAATTGAATGTTTGCTGTGGGGTGTTTGGTTTACAACCTGTTGTGTTGTATG
AACCTGCTTCGCACCTTGGTCAATATGCATGTTATCCGGTTTGCCTACACCATAGATCTACTGCTCCGTCACCATTTCCCAGTTTCAGTATGTGTATTGT
TTCTTCGTGTGATTTGGTTTGGTGTCGTCGCCTGGATGATCTCTACTTCAAGGGTCACAGCGATCAGCGGTGTCTTTGAAATGCGTCTGTGCTATGCCTG
TAACTGTTGTAGCTTCCAGTCTGTAACAACTGAGCTGAACTGCATAGCCGTCTGTAGTCCCTGCAT
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