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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig18889  (registered. 2012)
Contig Information
Length 2135 bp
Clones alternative view 144 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_oh Pistil at heading date 1
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_RDr Root of dessiccated seed 8
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 8
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 16
Wh_VABA Shoot with ABA treatment 3
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 8
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 5
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 9
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23 8
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 16
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XE Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115477551|ref|NP_001062371.1|| Os08g0538600 [Oryza sativa (japonica cultivar-group)]
Score 718
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig18889
TGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGATGAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC
AAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTA
ATCGCCGGTCAGCCATACGGCGGTGAATCCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTATAGGAGCTGGCCATGTTTGAAGTCATTACCCTTAT
CCGTACGCTCCTCGGTCCTCTTCCGTCCCTCTCCCTCCTGCTGCTGACAAGATGAAAATGGCTGGCTCTGCTGTGCTGCTCATTTCGCTCCTGTCGGCTG
TCGCCCCCCTACCCTCTGAAGCCCTCAACGTGAGAGGCCATCTGCTGAAATCAAAGACGTTCCGTTCTCCGCCCATCTTATTGGGACCTGGATCAGTCTC
AAACAAGTACCACCATGATGTCGACTTCCCCCGAGGCCACCTTGCAGTCAAGAGCTTTGATGCAGAGGTCGTCGATGAGAATGGCGTCCCTGTCCCGCTC
CATGAGACTTACCTGCATCACTGGGTTGCAGAACCATACTATGCTCTGAAGAACAGTCAGAGCCCCGATACGCAAAATCTTCCAAAAGGGATGCTTAAAA
GGAATGATGGAGTGTGCAAGACCACACTAGGCCAGTACTTTGGGCTCGGTTCCGAGACTCGCCACACTGCCACATGGGTTCCTGATCCTTATGGAATTGA
GATTGGCAATGAAGACAAGGCCCCTGAAGGCTATGAGGAGAAATGGTTGCTCAATATTCATGCCATCGACACAAGGGGCGTGGTCGACAAGCCTAGCTGC
ACCGAGTGCAAGTGCGACTTTTACAATGTCACAATTGATGAGTATGGGCGCACAATCTCAAAGAACTACACTGGTGGGCTATTTTGCTGCTATGATCAGA
CCCAGTGTCGGGTCAAAGAAGGGTTCAATGGCGAGGTGCGGAAGTTGTTCTTGCAGTACACCGTGACGTGGCTCGACTGGACTGATGCGGTGGTGCCTGT
CAAGATTTACATATTTGACGTTACGGATACCGCTATGCTCGATGGAACTCCTGAACATTCTTGCAAGGTTGAGTATCAAGTCGAGGAATGCAGCGCAGAA
AACCGAGCCAACAATGAGTGCATCCATACTAAGACTGCTAGAGCGGCCTTGCCGCGTGGAGGAGATATCGTGTTCAGTGTTGCGCACCAGCACTCCGGAG
GAGTCGGTGCTTCTTTGCATGGCCAGGACGGACGCCTTCTTTGTGAATCGCTTCCAACTTACGGCACGGGGAAGGAGGCAGGGAACGAGGCGAACTACAT
CGTTGGCATGTCGACGTGCTACCCTAAGCCAGGATCCATCAAGGTCAGCGACGGCGAGGTGCTGACCATCGTCTCCAACTACAGCAGCGACCGCCAGCAC
ACCGGCGTCATGGGCCTGGTCTACATCCTCGTGGCCGAGCCGCAGCAGCCGACTCCGGCGCCATCCCTGTGCTTCAGTTTCCCAGTCCCATGGTGCCTAC
CGGCATGGATGTCTAGCAACATGTGAAGAGTAGATTATCATCTACCCCTAGCTAATGGAGTGCAATGCAAATGGTGAGGAGTGGAGAAGCTGAAACAATC
ACCGTGGATCAATCGTCATAGTTATACGATGGATGTGTTTTTGTCATACTAGTATTACTAGCTAATATACAGAAGCAGTCACCAGTCAGTGAGCAATGTC
GTTTCGATGGACCTGATGTTCTATAATTAATTGTTATCAGTAGTCGTGTATATGAAGCTGAGTTGTATGAGTTGATCACCGCCATAAGAGAAACTAGTGT
CGATATAATAGTAAGTTGTTGTAGCTGACGTTGGCTAAGGAGGTTTTAGGGTGGGATACTCGCTGGACGCGAAGGTTGTAGCCGTGTAGACGTTGGGTTA
TAGGGAAAAGGACTGGAGAATTGAAGGGGTAGAAGAGAGCATAGGTAGGAACTCGATATTTCATTTCTTGCTTCGTGGCAAGGTTGATATGTCCTTATAT
AGACCCTTTAGGTCAGTTAGCGCAATATAATTCAA
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