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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig18736  (registered. 2012)
Contig Information
Length 1172 bp
Clones alternative view 149 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 2
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 1
Wh_r Root 4
Wh_yd Spikelet at late flowering 6
Wh_CSEC Callus 7
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_OKCS Seed DPA5 9
Wh_PCDAM Anther at meiosis 4
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 4
Wh_VSCB Liquid cultured tissue 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 5
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_SP 13
WH_XA Root 3
WH_XB Root 15
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 9
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 10
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|212723604|ref|NP_001131862.1|| hypothetical protein LOC100193240 [Zea mays]
Score 353
Evalue 2.00E-95
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig18736
CAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGNNNTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAGACCAAC
AATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCG
TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGCCTAAACGGCAGGTTTTCCAGCTCTCCCGCACCCGCCGCCGCC
ACATCCCCACTCCCCACCACCCCCTCAGCCATGGCGGTCGTCGAGCCGGTGCCCGGGGGCGACGTGAAGCTATTCAACCGCTGGACCTTCGAGGATGTTC
AGGTGAGCGACATCTCGCTGAACGACTACCTCGCGGTGACGTCGATGAAGCACTACACCTTCCTGCCGCACTCGGCCGGCCGCTACTCGGCCAAGCGCTT
CCGCAAGGCGCAGTGCCCCATCATCGAGCGCCTCACCAACTCCCTCATGATGCACGGGCGCAACAACGGTAAGAAGATCATGGCCGTCCGCATCATCAAG
CACACCATGGAGATCATCCACCTCCTCACCGACGCCAACCCCATCCAGATCATCGTTGACGCCATCATCAACAGTGGTCCACGTGAGGATGCTACCCGTA
TTGGGTCTGCTGGTGTTGTGAGGAGGCAGGCTGTGGATATCTCCCCCCTGAGGAGGGTGAACCAGGCCATCTACCTTCTGACCACTGGTGCCAGGGAGAG
CGCCTTCAGGAATGTCAAGACCATTGCTGAGTGCCTCGCTGATGAGCTGATCAATGCTGCCAAGGGCTCATCCAACAGCTATGCCATCAAGAAGAAGGAC
GAGATTGAGCGTGTTGCCAAGGCTAACCGTTAAGATGGATGTGCATCTGAGGGTCTCATGCTTTTGGCTGGAGATTTTGGACTGAATGTGTTTTACAAGA
TATCTAGAACTGTTTTAGCTATGCTTTAAGTTTGTGATGAAAGAACATTTCGATGTAGCGGCAAGGACTTGCCTGTCTTTATGAAACCAATTCCTGTTCA
GACAAATTTGGAGATGTTGAATGTGTCGTTGTGTTCTCTCATGATATGTCTTATCTAGTTCCGGGAATGTGT
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