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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig18371  (registered. 2012)
Contig Information
Length 1688 bp
Clones alternative view 399 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 35
Wh_e Seed DPA10 9
Wh_f Spike at flowering date 10
Wh_h Spike at heading date 4
Wh_oh Pistil at heading date 6
Wh_r Root 23
Wh_yd Spikelet at late flowering 8
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 8
Wh_EM Dormant seed with water absorption 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 5
Wh_KMV Shoot grown with continuous light after cold treatment 6
Wh_MS Seed DPA5 of DT3DL CS wheat 11
Wh_OKCS Seed DPA5 7
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 14
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 6
Wh_VSCB Liquid cultured tissue 8
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 11
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 7
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 5
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_SP 12
WH_XA Root 41
WH_XB Root 40
WH_XC Root, treated at 50 microM Al for 6h 33
WH_XD Root, treated at 50 microM Al for 6h 22
WH_XE Seedling, infected with leaf rust 6
WH_XF Seedling, infected with leaf rust 9
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|148508784|gb|ABQ81648.1|| glyceraldehyde-3-phosphate dehydrogenase [Triticum aestivum]
Score 667
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig18371
TGGAAAGACAAGATAACCATAAGATAACTTTGCAATCGCAAGAGACCGGAATGACATGTTATGGATAACTCAAGAAGATGAGTGAAAATGACTCATGATT
TAGTTCAAGCAAGTACATAATACCACCAAAATGTGAGCTCTAAGCCCAACCAACCATCAGGATACATCCAATAAAAGGTTTTTAGCTGACATAATTCCAT
ACAAAAATTTATTCTCAGAAGAAAGGCTTTGAACACTCCTCTGGGGCAAACCACTCTCCCCAGTAACTTCATGCCTCTCATTTACTTGGAGCTGTGCATG
TGACGGATGAGGTCGACCACACGGGTGCTGTATCCCCACTCGTTGTCGTACCAGGAGACAAGCTTGACAAAGTTGTCGTTCAGAGCAATCCCGGCCTTGG
CATCAAAGATGCTGGACCTGTTGTCACCCTGGAAGTCAGTGGAAACAAGGTCCTCATCCACGTAACCCAAAATGCCCTTGAGGTTTCCCTCAGACTCCTC
CTTGATAGCAGCCTTAATCTGATCATAGGTTGCTGGCTTCGCAAGTCTAACAGTCAGATCAACAACAGAAACATCAACAGTAGGAACACGGAAGGCCATT
CCAGTCAACTTTCCGTTAAGCTCTGGGAGCACCTTGCCAACAGCCTTTGCGGCACCAGTGCTGCTTGGAATGATGTTGAAGCTGGCAGCCCTTCCACCTC
TCCAGTCCTTGCTGGAAGGACCATCAACAGTCTTCTGGGTTGCAGTCATGGCATGAACTGTGGTCATCAAACCCTCAACAATGCCAAACCTGTCATTGAT
AACCTTAGCAAGAGGAGCAAGGCAGTTAGTGGTGCAACTAGCGTTGGAGACAATGTCGATGTCAGACTTGTATTCCTTCTCATTGACACCACAGACAAAC
ATGGGAGCATCTTTGCTGGGAGCAGAAATGATGACCTTCTTGGCACCACCCTTAATGTGAGCTGCAGCCTTGTCCTTGTCAGTGAAAACACCGGTGGACT
CAACAACGTACTCAGCACCAGCAGCAGCCCATGGGATCTCCTCAGGGTTCCTGCAGCCAAACACAGCTACCTCCTTCTGGCCGAAGAGAAGGGTCTTGGA
GTCCTTCACCTTAACTTCATGGTGCTTCCACTGTCCATGGACAGTGTCATACTTGAACATGTAGGTCATGTAGTCGGTGGTGATGAAGGGGTCGTTGACG
GCGACGAGCTCGACATCGGGGCTCTGGAGCGCAACCCTGGCCACAAGCCTGCCGATCCGGCCGAAACCATTGATGCCGATCTTGATCGGAGCCATGGGGA
AGGAAATCTGGAGCTGCGACGGACGGAGGGGAGGTTGAGAACAGATCGAGGATTGGGCCTCGTGCCGAATTCGGCACGAGGCAGCCTTTGAGGCTAAACC
AAGATGATTATGACCGCGTCCAGCAGATTCCGATAAAGAAGGGGGCAAACTTCCGTGACTTGCCAGGCGTCAAGGTCGGAGCGAATAACATTGTGGAGTG
GGATCCAGATGTTGAGCGTGTCTACCTCAAGTCCGGCAAGCCTTTGGTCCCTGACTATGCAATGTCCTTCATCAAGGGCAGATCACCAAAGCCGTTTGGT
CGGTTGTGGTGGGATGAGACAGTTCCCACGGTGGTGACCAGAGCAGAGCCCCATAACCAGATCATACTGCACCCGAATCAGGGACGTG
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