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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig18258  (registered. 2012)
Contig Information
Length 894 bp
Clones alternative view 122 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 4
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 1
Wh_r Root 4
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 11
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 7
Wh_KMP Shoot grown under continuous light 2
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 9
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VWD Shoot grown with dessication 2
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 15
WH_XB Root 9
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226499354|ref|NP_001147027.1|| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Score 302
Evalue 4.00E-80
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig18258
AACGAAATTTGAATATAACTTGCATCTAGAGCCGCAGCAGCATCCAAATCTAGCATTTCACCTAACGAGTTCGCATCAATATTCATTCAAAATCCAAAAA
CTAGGACCTACAGCCCAGAAACTGTAAAGACAAATGAGCACAGGAACATTACTTCAAAGTTGACTTATTCATACTTAACGGTGCAGATGTACCTGCAACT
GTTTGCACCAAACCACAGGACTCGATGGTCCATTAAACCAGACACAGTACGACTTCACACAAACGAGACAGCACTTGAACAAAGGCGCACCCACAGGACG
ACACAGGGTACAGCAGCAGCAGCAGGTCGAGTGAGAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTG
TAGTCGGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGA
CATTGTCGATGGTGTCAGAGCTCTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATGCCACCACGCAGACGCAGGACAAG
GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATG
CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGTGTCTTCACAAAGATCT
GCATCTTGAGGCGGTGGGGAAGGAGGATTCGACGAGCCTCGGGTCGATTGGAGACGAGATTGGTGGGGATTTGTTGGTTCCGTTCCTGGGAGCG
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