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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig18112  (registered. 2012)
Contig Information
Length 1483 bp
Clones alternative view 216 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_dL Crown of seedling 4
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 5
Wh_r Root 1
Wh_DPA20 Seed DPA20 4
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 5
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 10
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 7
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 7
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 4
WH_XN Leaves, plant was grown at constant 23 8
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 6
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 7
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 9
WH_XR Roots, 18 day old plants were grown hydroponically 7
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 9
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 11
WH_XA Root 4
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 10
WH_XD Root, treated at 50 microM Al for 6h 8
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 16
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 8
WH_XV Leaves, plant was grown at constant 23 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|50400847|sp|P83970.1|PMA1_WHEAT|PMA1_WHEAT RecName: Full=Plasma membrane ATPase; AltName: Full=Proton pump
Score 709
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig18112
TTTTTTTTTTGCAGAAAAAGAAGCTATGATATTTATAGACGAGAATTGTCTTTGTATAAACCCATGTGATGGGATAGCAAGCATGTGGCAGAAAATTTGC
AGTGATTATTTCTCGTCTTGCTTCCGCAAGATCACCGACTAGTTAGGGGAAACTGGGTAAAACGCGAAAACGATTACAACCACGCCGTGCTCCAAACACG
GTATAACTCCACTAGAACATTAAAACCTCTCTAGAAGACGGACAACCGAAACCATATATTTGGTAGCACTTTACAACTAGGGGCTGGTCAGATCAGCCAT
GTTTGTTTCATTCATTCACCGGAAAAATCTTAAAGCGGAGCTCCATTCCAATCTAGCTCCAACACGGATGTCATGTTTGTTGGTTCAATGTCCAATTTCC
TCACACGGTGTAGTTCTGGTTGATGGTGTCGATGTCAAGGCCCTTGAGCTTCACCACGGATTCAACGTGGCCCTTGAGTGTGTTGAGCTCCCTCAACCTT
GCAATCTCAGCTCTTCTCTTTGCTTGCTCAGCGATCTCAGAGAGCTCACGGTAGCTGCTCTTGTCGTTGAACAGTGTGTGGGAGGCCGGCTCCGGTGCTT
GAAGGCCATGGAGTGTTCTCTGTGCGGTAGCCCATTGTGCTTCCCTCTCCCCTTTGCCGTAGTTCTCTTTGGTGGTGAAAGCAGTCTTGTTCTGCAGGAG
GTTGTCCCAGGCCCTTCCACTCAGCACAAATCGGATGAAGAACTTGAAAATGTCGAGTGGGAAGTAGAACACAATGCTGAACAGCCAGATAACACCAGCC
CAGCCCCACCCGATTCCCTTGATCCTTGCGAAGTCCCAGTTGGCATAGACAGCGATGAGTGTTGCAACCAATTGTGCGAGGAGGAAGGCGGTAACCAAGA
GGAAACCTGGGCGCTCAACAAAGGACCAGCTACGGGAACGAGTCACAAAGATAAGAGCCTGGCTCACAATACTGACTTGGAGGTACAGTGCAGACATCTC
CTTAAATTCGGTGTTCCTGATTGACTCGACACCGAATTTGTTGGTGAAGAAGTCTGTCTTGTGGATGAGCCAGAAGAAGACGACAGTCACCAGAGCAAGG
TAGGTTCCCAGCACAACACCAGTGGCGAAGATTTCATTGAGCTTCCAGCTGTCGGGCAAGGGAGATGGCTTAACTCTGTCCTTGGATATTGTCATGATAG
TACCATCATTGAGAATGGCAATGATAAGGACCATGAAGGGAGCGAAATCAAATTTCCAGATCAGGGCAATAAGCATAAAGCCAAGCACAATACGGATGGT
GATGGAAACTGCATAGATCGTGTAGTTCTTCATCCTCTGAAAAATGCACCTGCTGGTCAGGACAGCACTGATAATGACACTGAGACCTGGCTCGGTAAGC
ACAATGTCTGAAGCACTTCGAGCAGCATCTGTAGCATCATCGACAGCAATACCAATGTCGGCCTTCTTAAGAGCAGGAGCATC
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