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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig17083  (registered. 2012)
Contig Information
Length 2455 bp
Clones alternative view 264 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_dL Crown of seedling 12
Wh_f Spike at flowering date 9
Wh_h Spike at heading date 8
Wh_oh Pistil at heading date 8
Wh_r Root 5
Wh_yd Spikelet at late flowering 4
Wh_DPA20 Seed DPA20 5
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 7
Wh_OKCS Seed DPA5 8
Wh_PCDAM Anther at meiosis 8
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 7
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 1
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 6
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 5
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 7
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 9
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 8
WH_XA Root 11
WH_XB Root 28
WH_XC Root, treated at 50 microM Al for 6h 22
WH_XD Root, treated at 50 microM Al for 6h 15
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 3
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218191472|gb|EEC73899.1|| hypothetical protein OsI_08713 [Oryza sativa Indica Group]
Score 711
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig17083
TTCTGCTGTCTGCCTTGTATGCTGATCTATTGGACTCCTCCAGGATGAGTGAAGGTTTTATGATGCTTCTAGAGTCAACAGAAGATCTATCTGTGGATAT
ACCAGACGCTATTGATGTCTTGGCTGTTTTTGTGGCACGTGCCATTGTTGATGAAATACTGCCTCCTGTTTTTCTCACTCGAGCTAGAGCATTGCTTCCA
GAATCTTCAAAAGGTATTGAAGTTCTGCAGGTTGCTGAGAAGAGTTACTTGTCAGCTCCTCACCATGCGGAGTTAGTTGAACGCAAGTGGGGCGGGAGCA
CACACTTTACTGTAGAAGAGGCGAAAAAGAGGATCCAGGATATTCTGAGGGAGTACATTGAGAGTGGAGATACAGATGAAGCCTTTAGGTGCATAAGGGA
GCTGGGCCTCCCATTCTTCCATCATGAGGTTGTGAAACGTGCTCTCATCCTTGGTATGGAGAATCTGTCGTCACAGCCATTAATCCTGAAGTTGTTGAAG
GAATCAACAACTGGCTGTTTGATCAGTTCTAATCAAGTGTCGAAGGGTTTTTCTCGGGTTGCTGACAGTGTTGATGACCTGAGCCTTGATGTTCCTTCAG
CCAAAACACTTTTTGACAAGCTGCTTTCCACAGCCATATCTGAAGGGTGGCTTGATGCTTCGTTCTGTAAATCTGCTGCCCCTGGTGAAGATATGTGGAA
TGCAAGCAATGAAAAGGTGAAGCATTTTAAAGAAGAGTCTGGTCACATAATTCAGGAGTATTTCCTCTCAGATGACGTCCCGGAACTCATTAGAAGCCTT
CAAGAGCTTTCTGCCCCTGAATACAACGCCATTTTCCTAAAGAAGCTCATCACGCTTGCTATGGACAGGAAGAACAGGGAGAAGGAGATGGCTTCTGTAC
TTCTCTCAAGACCGGAAGGAGCGGAGCCGCCGAGCCGGGAAGAGCCACCATCCCATCGCCTCCGTTTCCGAAGGGTCAGAGATGGCGGACCGTGCTAACC
ACCCGTCTGTCATGCAGAAGTTTGGTGGACAGTTCCACCTTGCCTCCAGCTTCTCTGAGGGTGTTCGTGCTCGCAACATCTGCCCTTCTGTGCCATCCTA
TGAGAGGCGCTTCACCACAAGCAGCTACATGACTCAGAACCTTGGCATCAGTGTCCCAATGATGTCATCTTCTCCATTGTTTGCCAATGCACCCCCTGAG
AAGAAAGGTGTCAAGAACTTTGCGATTGACTTCCTCATGGGAGGAGTGTCAGCTGCAGTTTCCAAGACTGCTGCAGCTCCTATTGAGCGTGTTAAGCTGC
TTATCCAGAACCAGGATGAGATGATCAAGGCTGGCAGGCTCTCTGAGCCATACAAGGGTATTGGTGACTGCTTTGGGCGCACCATCAAGGATGAAGGCTT
TGGCTCACTGTGGAGAGGAAACACTGCTAACGTCATCCGTTACTTCCCAACTCAGGCTTTGAACTTTGCATTCAAGGATTACTTCAAGAGGATGTTCAAC
TTCAAGAAGGACAAGGATGGTTACTGGAAGTGGTTCGGTGGCAACCTTGCTTCTGGTGGTGCAGCTGGTGCTTCCTCGCTGTTCTTCGTGTACTCCCTTG
ACTATGCTAGGACAAGGCTGGCCAATGACGCAAAGGCATCCAAGGGTGGAGGTGAGAGGCAGTTCAATGGCCTGGTTGATGTCTACCGCAAGACTCTCAA
GTCAGATGGTATTGCTGGGCTTTACCGTGGATTCAACATCTCCTGTGTTGGAATCATTGTCTACCGTGGTCTGTACTTTGGACTGTATGACTCTCTGAAG
CCAGTTCTCCTCACTGGCACTCTCCAGGACAACTTCTTTGCCAGCTTTGCTCTTGGTTGGTTGATCACCAACGGTGCAGGTCTTGCATCTTACCCCATTG
ACACCGTCCGCAGAAGGATGATGATGACCTCTGGAGAGGCTGTCAAGTACAAGAGCTCCTTGGATGCTTTCCAGCAGATCCTGGCGAAGGAGGGTGCCAA
GTCCCTCTTCAAGGGTGCTGGTGCCAACATCCTCCGAGCCATTGCTGGTGCTGGTGTGCTCTCCGGCTATGATCAGCTCCAGATCCTCTTCTTCGGCAAG
AAGTACGGCTCAGGCGGTGCCTAGACGGGAAGAAATGATGACGAACAAGAGAAGTCTGTTCCCAGTCCTGCCCTTCGAGGATCTGGCGAACTTTTATCTT
TTTAACGTTGGAAGGCAATAATTTCTGTAGAGGGTGGATTTTCCCAACATTCGTTTTTGGTGGAGGCATCGAACTCCAGAGGTTGTCGTAGGTTGGCGGC
AGCGTTCTCAAAACATTTACTATCATAGGGGTTGAGTTTGAGTCCGAGTATGTGCCCTGAATCGTTACTGGGCAATTTTCCTTAAATACATTGTCCTCGA
ATCCGACTGAGATTATTATGGTCCAAGTTTATTCTGTTGGTCTTGAAAAAAAAAA
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