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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16190  (registered. 2012)
Contig Information
Length 1430 bp
Clones alternative view 66 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 2
Wh_r Root 1
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 2
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 7
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23 10
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 2
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 9
WH_XV Leaves, plant was grown at constant 23 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|56682917|gb|AAW21813.1|| cysteine protease [Triticum aestivum]
Score 769
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig16190
AAAGACGGAACACCATTCTGATGGAAGCAATACAAATTATGTACAGAATTATTCAGGAGTTCTTTAGCCACATCCAAATAGCGTGTGGCAGACATGCATG
GCGTAGCAAATTTAGCAAATGCATAAGTTATACAGCAAGCATTCTATTGCGACTTCGCATCTTCGCTGCTGATACCACAACGACGATGGAGCCTAGCCGA
CTACTACGTATTAAAGTTTCTTTCTAGCGATACACACACCGAAACCAAGATCGACACCAGGAGGGCCGCCGATCAGATCAGATCAGACCAGAGCCTACTC
GTCCTTGGAGGCGTGAGTGGCGGACACCGTGGAGACCATGGAGTCGACGCCACACTTGTTGCGCACGTTCGAGCCCCTGCAGATCTTGTAGTAACCCTTG
TCCCCCCAGTTCTCGCCCCATGAGTTCTTGATGATCCAGTAGGGCTTCTCCTTGAAGCGGGAAGGCGCGAAGCCAGACGCCCCGTAGCCGACGAGAAGGA
CACCGTGGTCGAGGTGCCTGCCGCAGATGTATGGGCATGACACTCCGCCGATGTATGTCTGCATGTATGCGGCGTTGATACCGATGGCCAGCGGTCCATA
TTTCACAAGGTTAGCAGCAATCTGTTCTTCATCAACAGCGACAACGCTGAAGTTTTGAACTGAAGCAGCAATCTTGGACTTCTCAAATTTGCAGGTACCG
TCCTTCCCGGTGTAAGGGTAATCCTTTTCTCTCTCAAGGCCACCAGATTTCAACAGATAGCTAAAGGCTGAAGTCATCAACCCACCATTGCATCCAGCAT
CGCATGAATCAGGTTCTGCTGGGTCGCACTCATGGTCGCAGTCGACCAGCTGCTGCTCGGAGAGCACCTCCATCTTGCCCGTGGCCAGGTAGTTGGCTCC
CTCCAACGCCCCGGACGCGCTGAACGACCAGCACGACCCGCACGAACCCTGGTTCTTGACGGGGCCGACGGCGCCGTGGTCCCTCCAGTCGAAGTCCTCG
GGGAGGCCGTCGGTGGGGAGGACGGGCGCGTCGTGCGCCGACCCGGCCATCTCCCGCAGGAACGACCGCCGGGTCGTCTTGAGGCCCAGGAAGGTCCGGC
GGAACTCGGCCGGGGTGAGGTCGGAGAACTTGGTGACCCCGTGCTCGGCGGACGGGTCGAGCATCTGGTGCCGGCGCGCGCGGCGGAGGTTGGCCTTGAA
GACGGAGAGCCGGTGCGCGTGCTCCTCCGCGTCCCTGTAGGTCTTCCCGAACCGCTGCACGAAGCCGAGGAACTGCGAGTCGAGCTCCAGGTCGTTGTCG
AGGGGGTCGGCGCCGCCGACGACCTGCCGGATCAGGGGCTCCTCGTCCCCCGCGGCCGCCGCTGCCGGCGCCGGGGAGAGGAGGAGGCCCAGGAGGACGA
GGAGAGCGGCCACGAGGCGATGATCCATTG
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