Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16102  (registered. 2012)
Contig Information
Length 1661 bp
Clones alternative view 100 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 4
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 3
Wh_oh Pistil at heading date 1
Wh_r Root 2
Wh_yd Spikelet at late flowering 5
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_MS Seed DPA5 of DT3DL CS wheat 7
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VSCB Liquid cultured tissue 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_CA 1
WH_SP 2
WH_XA Root 7
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|399414|sp|Q03033.1|EF1A_WHEAT|EF1A_WHEAT RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
Score 899
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig16102
TTTTTTTTTTACACAGATAAAATTCAACAAACTAGTATTAAAAGACACAACCAAGTCTCATAACATCCAGGTTTCACCGAAGCTTACATTAGGACAGTAT
GTAGAAGGCACAAGACAGACACCACTAAGGGCACGATATGCAGCGCTAACAGCTGAACAGCTAGAATATACCCAGTACGAGCAATGCCCTTAACAAAACT
CAGCCAATACTAAAAACTGCTTGGTGCCTGAAACAGTGATTTGGATATCGATTGTCAAATTACTTCTTCTTGATGGCAGCCTTGGTCACCTTAGCCCCGG
TTGGGTCCTTCTTCTCGACGCCCTTGATGACACCAACAGCCACAGTTTGCCTCATGTCACGTACAGCAAAACGACCAAGAGGAGGGTAAGTAGCAAAGGT
CTCCACAACCATGGGCTTGGTGGGAATCATCTTCACTATGCCAGCATCACCATTCTTGAGGAACTTTGGCAGGGCCTCCAGCTCCTTACCAGATCGCCTG
TCAATCTTGGTCACCAGCTCAGCAAACTTGACAGCAATGTGCGAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCAATCTGACCAGGGTGGTTCA
TGATGATGACCTGGGAGGTGAAGTTGGCTGCCTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAACAAACCCACGCTTCAGATCCTTCACGGCAACGTT
CTTGACATTGAAGCCAACATTGTCACCAGGAAGCGCCTCCAGGAGAGACTCATGGTGCATCTCAACGGACTTGACCTCAGTTGTCAGACCAGTGGGACCA
AAGGTGACAACCATACCAGGCTTGATGACACCAGTCTCAACACGGCCAACAGGCACAGTTCCAATGCCACCAATCTTGTAAACGTCCTGGAGGGGAAGAC
GGAGGGGCTTGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGCGCCTCAAGCAGGGTTGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAAT
CATGTTGTCACCCTCAAACCCAGAGATGGGGACGAAGGGAACCTTGTCAGGGTTGTAGCCGACCTTCTTCAGGTACGAAGAGACCTCCTTAACAATTTCT
TCGTAACGAGCCTTCGAGTACTTGGGAGTGGTGGCGTCCATCTTGTTGCAGCAGCAGATCATCTGCTTCACTCCAAGAGTGAAAGCAAGGAGGGCGTGCT
CACGTGTCTGGCCATCCTTGGAGATACCAGCCTCAAAACCACCAGTGGTGGAGTCAATGATGAGAACAGCACAGTCAGCCTGGGAGGTACCGGTGATCAT
GTTCTTGATGAAGTCACGGTGACCAGGGGCATCAATGACGGTGCAGTAGTACTTGGTGGTCTCAAACTTCCAGAGAGCAATATCGATGGTGATACCTCTC
TCACGCTCGGCCTTGAGCTTGTCAAGCACCCAGGCGTACTTGAAAGACCTCTTGTTCATTTCAGCGGCTTCCTTCTCGAACCTCTCGATGACACGCTTGT
CAATGCCTCCAAGCTTGTAGATCAGGTGGCCAGTGGTCGTCGACTTGCCAGAGTCGACGTGGCCAATGACCACGATGTTGATGTGAGTCTTCTCCTTACC
CATGGCTGAAGCAAACTCGAAGGAAGGAGAGGGAACCGAGAGGAGGAGGCGGCGGCGGCGG
page-top