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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15952  (registered. 2012)
Contig Information
Length 1042 bp
Clones alternative view 391 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_SH - 5
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_SHDr Shoot grown with dessication 3
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 4
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 15
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 22
WH_XN Leaves, plant was grown at constant 23Ž 113
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 21
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 56
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 8
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XE Seedling, infected with leaf rust 18
WH_XF Seedling, infected with leaf rust 23
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 38
WH_XV Leaves, plant was grown at constant 23Ž 31
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 8
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 9
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|47847750|dbj|BAD21528.1|| putative brown planthopper-induced resistance protein 1 [Oryza sativa
Score 291
Evalue 9.00E-77
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig15952
ATATTGCCTCCATTCCTCTTAAATATTACAATGAGTTTTTGTTTTTCTTGCCGTGGAATCTGGAAGTCATTGCTCATGGAAACATTTTCGTGTGCAGATA
CCAAACAGTACAGTACAGAGCAGAAGCTTCCTGGCGTGCTTCTTTACAAGGAAAAGCTCTCCTAAATGCTCCCAGGCTTATTTTTTGCGATACAGACTGC
AAACACTTTTACAGACTATAGGATCTGCCTGCTACTCAAAGTACCGCGGACACACATATTTACAGATCCACAAGTACCGGGCATGGACTCCTGCATCTCT
AAAACTTCAGCATGGCCTCCAACGCGCGAAGAACGTCATCGCGGGTAACTATACCTATTACTTGATTGTCCTGGTTTACTATCGGTAATCTGTGGATCTT
CTTCCTGAGCATCAGAGCTGCGGCATCGGTCACTGTTTTATCGCATGATAGCGTGATTGCTGGAGATGTCATCACATCTGCAATCTTCGTCTTTGGCCCA
TGTGAAGCCCTCACGTGATCGCTCTTGACGACGACCCCGACACATCGGCGGGCACTGTCGACAACCGGGAGGCCTGACACGAGCTGGAAGTGGCCTTCAA
CCTCCACCAGCGCCTGCTCCGCTGTGACCATCAGCACGGGCGTCGACATGGCCTCACGCAGGAGAGGCCCCCGCTGCTGATCGCCGGCATGGGATGGTTG
TCGTTGTTGCTGCTGCTGCTGTGACTGGAGGTATGCGCGGAGGTCGTCGTAGCTGAGGAGGGAGAAGTTCTCGGGCCACTCCCCGGAGATGATGGCATCG
GGGTTCTCGTCGAGCCCGAGCCGGAGCCCGCTCCCGTCCATGAACGTGGACGCCCGGCACTCAAAGGTCCCGCCACTGGCTCTACCTCTTCTGGCCTTAC
TCTTGGCCCCTTTGAACATGGAGCAGCTCTGCAAGGTATTGATGCACGCCATGGATGCTAGCTACTCTTCACTGCTTCCTTGTCTTGTGTTGTGGATGTT
GTCTGACTGTGTTCTCTTGCAGATCCCAGCAGGAGGGCTCCA
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