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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15388  (registered. 2012)
Contig Information
Length 1164 bp
Clones alternative view 210 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_f Spike at flowering date 6
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 4
Wh_r Root 6
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 8
Wh_EM Dormant seed with water absorption 3
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 8
Wh_PCDAM Anther at meiosis 6
Wh_RDr Root of dessiccated seed 13
Wh_SHC Shoot grown with cold treatment 5
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 8
Wh_V483 Shoot grown under cold condition for 3days 7
Wh_VABA Shoot with ABA treatment 3
Wh_VHS Shoot with heat shock treatment 4
Wh_VSCB Liquid cultured tissue 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 10
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 8
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 7
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XA Root 1
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 16
WH_XE Seedling, infected with leaf rust 12
WH_XF Seedling, infected with leaf rust 6
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115461767|ref|NP_001054483.1|| Os05g0119300 [Oryza sativa (japonica cultivar-group)]
Score 263
Evalue 2.00E-68
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig15388
TTTTACAAATGTTGCTTGCCCGCCCTTTTGGAGGAGCATCGAACAGTTGAAATCACAGCAAAGCAAACACGACACCAATTCAGNNNAAGATGCCGCTGTA
AGAGCAACGACTTATGAACAGCGGTAAAGCATAGCACCAGACAGAATTCAGGTACTTATTAGCAAGTCATATCTTGTCACAGACGCAGACTAGAGTGCCA
AATCATATAGAGGAAAGGATGGAAGCTCCACGAGATCCGGGCAGCAACCACACCACACCCTGCTTAGATACATCTCAAAGGCTTTCCCTGACCAAACCAA
GTTCTGGAAGCCTACACGAAGAGTTTAGGTATTTTTTTGATTCATCAGCCATGGTGAAGCTACTAGCTAGCGCATTACTTCCACTTCTTGAACTTTCCGC
CGCCGCCGAACATGCCGTGCTTCCCATGCTTGCCGTGCTTGAACTTGCCGTGGCCGTGCTTCCCGTGCTTGAACTTGCCGCCGTGGTGGCCGTACCCGCC
GCCATAGCCTCCATGGCCGCCCATCATGCCTCCCATCATGTGTCCACCTCCACCGTGGCCGCCGTGAGAAATCTTGTGTGCTCCGTAAGCGGCGGCAGCA
GCTGCTGCGCCTCCAGCTAGCATGCCGCCCATGCCCATGCCTCCTCCTCCATGGCTACCACTGTGACCAGATGAGCCAGGGTAGCCAGCAGGGGGATAGC
CATGCTGCTGTGGAGGGTAGCCATGCTGTTGCGGTGGGTAGCCATGCTGAGGAGGGTAGCCTTGCTGAGGGTATCCATGCTGCTGCGGGGGGTACCCGTG
GCCACCAGATGGGTAGCCATGGCCACCACCATGAGCACCGGCAACACCGTGCATGATGTTGGAGAGGAGCCCCTTCTCCCCGTCACTGCCACCCGCTCCG
GGCGCAGGAGGGTATGCCCCAGGTGCAGGAGGGTATGCCCCAGGTGCAGGTGGGTAAGCTCCAGGTGCAGGCGGGTATCCTTGCTGTGGAGGGTAACCTC
CCTGCTGCGGCGGGTACCCTTGCGGAGGGTATCCCCCCTGGCCACCGGGTGGGTACCCATGACCGTCGTTGCCTCCTCCCATTGCTGTCGAGGGACTTAA
CTAGAGGACGAGAAGACCAGCGATTCTGCGAAGTTGAAGAAGAGGAAGCAGCCGAGCCGATCTG
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