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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1500  (registered. 2012)
Contig Information
Length 1321 bp
Clones alternative view 545 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 5
Wh_SH - 34
Wh_KMP Shoot grown under continuous light 14
Wh_KMV Shoot grown with continuous light after cold treatment 5
Wh_OKCS Seed DPA5 8
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 11
Wh_V483 Shoot grown under cold condition for 3days 5
Wh_VHS Shoot with heat shock treatment 16
Wh_VWD Shoot grown with dessication 9
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 32
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 20
WH_XN Leaves, plant was grown at constant 23Ž 63
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 25
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 57
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 123
WH_SP 3
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 11
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 9
WH_XV Leaves, plant was grown at constant 23Ž 19
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 14
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 13
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 32
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|31753114|gb|AAH53854.1|| Unknown (protein for IMAGE:5194336) [Homo sapiens]
Score 525
Evalue 5.00E-147
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1500
ATCCCCTATGTTAGCTCCAGTTCCTTAAATAGCTCCATCCTCCACACGTCTCAAACCATCTCCACACTCTTCAGTTTTCATTGTTTGGAGAACACACAAT
ACACCTCCCACCTTAGCAGCGCAATGGCGACCACCACCATGTCCCTCTCCTCGACCTTCGCCGGCAAGTCGGTGAAGAACGTGGCTTCATCAGCTCTCTT
TGGTGAGGCCCGTGTCACTATGCGCAAGACCGCTGCAAAGGCCAAGCCGGTTTCATCAGGCAGCCCATGGTACGGTGCCGACCGTGTGCTCTACCTCGGC
CCGCTTTCCGGAGAGCCCCCGAGCTACTTGACCGGCGAGTTCCCCGGCGACTACGGATGGGACACCGCCGGGCTCTCGGCCGACCCCGAGACCTTTGCCA
AGAACCGGGAGCTCGAGGTGATCCACTGCCGGTGGGCCATGCTCGGTGCGCTTGGATGCGTCTTCCCCGAGCTTCTTGCACGCAACGGCGTCAAGTTCGG
CGAGGCGGTATGGTTCAAGGCCGGTTCCCAGATCTTCAGCGAGGGTGGCCTCGACTACCTGGGCAACCCCAGCCTCGTGCACGCACAAAGCATCCTTGCT
ATCTGGGCATGCCAAGTCGTGCTCATGGGCGCTGTTGAGGGGTACCGCATTGCTGGCGGCCCACTCGGTGAGGTAGTCGACCCACTCTACCCCGGGGGCA
GCTTCGACCCACTGGGCTTGGCTGACGATCCAGAGGCATTCGCGGAGCTCAAGGTGAAGGAAGTCAAGAACGGTCGCCTCGCCATGTTTTCTATGTTTGG
CTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCACTCGAGAACCTCGCTGACCACCTCTCCGACCCTGTCAACAACAACGCATGGGCGTTTGCCACA
AACTTTGTCCCGGGCAAGTGAGGCGTTGGCGCTCGCTAGCTGCGAGTTGTAGCCATATATCAAGGCAACTGCGGTGAACTGCACACATAATGGGTGGTTC
AAATTGTAACATCATGGTGTAAATTACAAGGATCTTTGGGGAAATGGTTTGATCTGCCCGCTTGCTTCATGTCCTGGATGTAGCCTGTGTGTTGCTCCAT
GAGAAATGAGAACGATGAATACTTGGGCGTTACTTAGTCAGAGGTCGCTCTTCGTGATGGCAACTTATGCTCTCATTTTCTTATGGTCCATCGACCATCG
TGATCATGCTGTCTGTTCGGAGAGCCCGTTTGCTTGTATGGTTGAACGCCGGCCAGCCCCAAAGTTGTACAAAGAGTCATTTTCGTTCNNTTTTACTAAT
GCATTGGCATGCAATGTTTCT
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