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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig14461  (registered. 2012)
Contig Information
Length 1527 bp
Clones alternative view 42 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 3
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 1
WH_XA Root 1
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XV Leaves, plant was grown at constant 23 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|126544454|gb|ABO18602.1|| SGT1-1 [Triticum aestivum]
Score 745
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig14461
ACCGTCGATCTCTATTCACCTCTCCCAAAGTCTTCGTCTGGTCTTCTCCACCTCGACGCAGACATGGCCGCCGCCGCCGCGTCGGATCTGGAGAGCAAGG
CCAAGGAGGCCTTCGTCGACGACGACTTCGAGCTGGCCGCCGAGCTCTACACCCAGGCCATCGAGGCGGGGCCGGCTACCGCGGAACTCTACGCCGACCG
AGCCCAGGCGCACATCAAGCTGGGCAGTTACACTGAGGCTGTAGCTGATGCCAACAAAGCAATTGAACTTGATCCTTCGATGCATAAAGCATACCTTCGG
AAGGGCTCTGCTTGCATCAAGCTGGAGGAATACCAAACTGCAAAGGCTGCTCTTGAAGTGGGTTCTTCTTATGCATCTGGTGACTCGAGGTTTACTCGTC
TGATGAAGGAGTGTGATGATCGTATTGCTGAGGAGGCTAGCCAGGTGCCAGTAAAGAATGCCGCTGCGGCTGTTGCTTCAGCTACATCTTCGGGGGCATC
TTCCGGGGCTACAACTGTGGCTACTGAAGCTGAGGACCAGGATGGCGCAAATATGGAGAATGCACAGCCAACGATAGAAGTGCCAAGCAAGCCCAAATAC
AGGCATGACTACTACAATACTCCTACAGAAGTGGTACTGACTATATTTGCTAAGGGTGTTCCAGCTGACAGCGTGGTTGTTGACTTTGGTGAACAGATGC
TGAGTGTCTCAATTGAACTTCCCGGTGAGGAACCATACCATTTTCAGCCTCGTCTGTTTTCAAAGATCGTCCCAGATAAGTGCAAGTATACTGTGTTGTC
TACAAAGGTTGAAATGCGCCTTGCAAAAGCTGAGCCAGTAACTTGGACATCATTGGATTATACTGGTAAACCAAAGGCTCCTCAGAAGATAAATGTACCA
GCTGAATCAGCCCAGAGGCCATCTTATCCATCATCAAAATCCAAAAAGGACTGGGATAAGCTTGAAGCTGAAGTGAAAAAACAGGAGAAGGATGAAAAAC
TTGATGGCGATGCTGCATTGAACAAATTTTTCCGTGAAATTTACAGTGATGCTGATGAAGATATGCGTAGAGCAATGATGAAGTCTTTTGTGGAGTCTAA
TGGAACCGTTCTCTCAACCAACTGGAAGGATGTCGGGAAAAAGACGGTTGAAGGAAGCCCTCCTGATGGAATGGAGCTCAAGAAGTGGGAGTATTAATGA
ATCCAGATCATCCATGTTGTAAATCCTGGTCGGGTCGTGAGTGTTAACTTGGCTGCAGACTTGCAAATCAGTGTCGGTCGGATTATTGTGTGTTGCTCTT
GATTCTGTTTCCGTATTTGTAAGCTGTTTGCGTGGCAGGTTAGCTTTTAAGTACTTATCCTAGTTTTGCGAGCTACAGTTGGTAATAGAGTAAGCCATAC
CTGTGCATCTGTGGTATGGAAGTGCAAAACGTCGTTGTAACTGGTGCCAAAACTATCATCTGTGAAACGGTGCTATTTTTTGTCTGAAATCTGCGCATCA
CACTTTATTTTTGTTTGAAAAAAAAAA
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