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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig14117  (registered. 2012)
Contig Information
Length 1760 bp
Clones alternative view 199 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 6
Wh_SH - 5
Wh_KMP Shoot grown under continuous light 6
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_PCDAM Anther at meiosis 2
Wh_SHDr Shoot grown with dessication 5
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 10
Wh_VHS Shoot with heat shock treatment 3
Wh_VWD Shoot grown with dessication 11
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XN Leaves, plant was grown at constant 23Ž 13
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 12
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 28
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 1
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 16
WH_XF Seedling, infected with leaf rust 10
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 15
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 11
WH_XV Leaves, plant was grown at constant 23Ž 4
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115589736|gb|ABJ15727.1|| serine hydroxymethyltransferase [Triticum monococcum]
Score 959
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig14117
ATGAGCTCACGAACCGCTCAAGATCTCAAAGCCGAATCATATGTGTTATCCAACGGAGCACATGGAGAAATGCGTGTAAGTAAATGTTTATCCAAGAAGG
ATGGCGGTTCATATAGCATATCAGCGAAGCATCTTACAGTATGTGCCTGCAATAAGAAACTATTGACAAAGTTCCCATATTCTGTAAAATGCTTGGATTC
CTTTTACATATGGTGGCGCTTCATCATGCATCTATTGTTTACATGGACTTGTACTCAGTTGTGCTTCCTGGTTGCTTCCTTGCTGTTGAAACATAGCAGT
TCTTAGTTCTTGTACTTCATGGTCTCTTTCTCGAATCCAATTGTTGGGAATTGTTTCGCATATTCCTCCACATCGTGGCGAAGCTTTGCAATTTCAGCTT
GGATGTTGCTGTCGGATTGCAAAGTGGCAACGAAGTCCTTCAGTTTGGTACCTGCTGCTGCAGCTTTAACCTTCAAAGCCAAGTTCACTGCCGAATCGAA
GAAGTCGGCAACCTTGGCGAAGTCCTCCTCAACAAATCCTCTTGATGTAAGCGCGGGGGTTCCCATCCTGATGCCTCCGGGTACCATAGCTGAAACATCA
CCAGGAACTGTGTTCTTGTTTGCTGCAATATGCACATTTTCTAAAACCTTCTCCACTCGTGAACCATCTATTCCCTTTTTCTTGAGGTTCACCAAAACTA
AATGGTTATCAGTCCCACCAGAGACAATGTCGTAGCCTTTTGAAGTTAAGCTCTCAGCAAATCTAGCAGAGTTACTCATAACTTGCTCTTGATAAGCTCT
GTACTCCTGAGTAGTTGCCTGCTTAAGCGCAACGGCAAGGCCAGTAATAGTATGGTTATGGGGTCCACCTTGCAGACCTGGGAAGACAGCTGCATTGATT
TTGTCCTCAAAATCATACTTAACCTCCTTCCCTTGTTTGTTTATTTCTTTCACCCCCTTCCGGAAAAAGATCATGGCTCCACGTGGACCACGGAGTGACT
TGTGGGTAGTGGTAGTCACCACATCTGCATACTCAAAAGGAGACGGAATGACACCAGCAGCAACTAGCCCACTGATATGTGCCATGTCTGCGAGAAGAAC
TGCCTTCTGCTTGTCACAGATCTTCCGCATGCGGTTATAATCATAAAGGCGGGCATATGCACTAGCACCAGCAACAATCAACTTTGGCCTAAACAGAACG
GCACTTTTCTCCAACTGGTCATAATCAATCAAGCCAGTGCTTTCATCCAGTCTGTAAGGCATTGTCTCAAAGAATATTGAAACTGCTGAGATTTTCTTTG
TGTCAGTCTGGTAACCATGGGAAAGATGTCCACCGTGAGGAAGATCCAGAGCCATAATTCTGTCATGTGGCTTCAGCAGAGCAGTGTATACATGGAAGTT
GGCAGGTGAACCCGATAGAGGTTGCACATTCACTCCCCACTTCTCCGGGTCCAAATTGAAGGCCTCCAAAGCACGTTTCTGACACAGCGTCTCGGCCATA
TCAATGTATTCGTTTCCACCGTAGTATCTCGCGCCGGGGTACCCCTCGCTGTACTTGTTTGTCATGACGGATCCCACCGCCTGCATCACCGAGAGGGAGG
TGAAGTTCTCCGACGGGATGAGCTCCAGCCCCTTCCATTGGCGGGCCTTCTCGAGCTCGATGATGTCGGCAATCTCGGGGTCGACCTCCTCCAGCGGCGC
GTTCAACTGCTTGGGCCAGNNNNCTGCGGATCTCTCCTCCGTCGCCGGCAGGGACGCCAT
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