Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig12513  (registered. 2012)
Contig Information
Length 774 bp
Clones alternative view 15 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_f Spike at flowering date 2
Wh_VSCB Liquid cultured tissue 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XA Root 1
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|108705769|gb|ABF93564.1|| SNF7 family protein, expressed [Oryza sativa (japonica"
Score 392
Evalue 3.00E-107
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig12513 
ACTCCTTCCGCATCGGCGTGTTCGTTCCCCACTGCCTCTGCTTCCGGTCGATCGAGACGAACCACCGGAGCACCACCAGCCGCCGCCGCGATGGAGGCGG
TGAAGAGCCTCCTGAAGCCGAAGCCGACGCCGCAGCAGCAGCTCCGCGAGTGGCAGCGCCGCCTCCGCAACGAGGGCCGCAACATCGAGCGCCAGATCCG
AGACGTGCAGAAGGAGGAGAAGAAGGTGGAGAAGGCCATCCGGGACGCCGCCAAGCGCGGCGACATGGGATCCGCCAAGGCGCTGGCCAAGGAGCTGGTG
CAGTCGAGGAAGGCGGTCAACCGCCTCTACGAGAACAAGGCCCAGCTCAACTCCATCTCCATGCACCTCGGCGAGATCGTCGCTACTACTAGAACAGTAG
GACATTTGTCCAAGAGCACTGAAGTAATGAAACTTGTCAATAATCTTATGAAGGCCCCAGAAATAGCAGTCACCATGCAGGAATTCAGTAAAGAGATGAC
AAAGGCCGGCGTGATGGAAGAAATGGTCAATGATGCCATGGATTCAGCACTGGACGATGAGGGCATGGAGGAGGAGATCGAGGAGGAGGTTGATAAGGTC
CTTTCTGCAATCGCCGGGGAGACTGCGTCCCAGCTTCCTGACGCTGTCCGCAAACAAAAAGAGAAGGTCACACAACCTTCGACAAGCGAATCTGCACAGA
GAACTGCTGTAGCGGNNTCCGTTGACGACGACGACGATGATCTAGAGAAGATAAGAGAAAGGCTCGCCAAAGTG
page-top