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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig12182  (registered. 2012)
Contig Information
Length 894 bp
Clones alternative view 123 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_oh Pistil at heading date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_DPA20 Seed DPA20 5
Wh_EM Dormant seed with water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 1
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 6
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23Ž 5
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 8
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 5
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_CA 1
WH_XA Root 5
WH_XB Root 13
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115452901|ref|NP_001050051.1|| Os03g0337800 [Oryza sativa (japonica cultivar-group)]
Score 383
Evalue 2.00E-104
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig12182
AAACTAGGTTCCGTGAACCCAAATGTTTAAAGAAACTCTGCATAAGCATCTCTGAAACATCCAACAGAACAAACACGATATGATATTTAAGGTATCTCAG
ACGCGGCACACAGATATTGCACAGAAAACAGTTATGAACTTCAGATGCTCCAAAATCAGGCTAACCCTTCATAATACCAGAAAGCTAAAGCTTCATGTCA
GACCTTCACTTCTTGGCCTTGGCCTTCTTTGGTGCCGCTGCTGCCGGAGCTGGAGCTGGAGCTGCAGCCGCTGGTGCTGGTGCATGATCTCTGGGGCCCT
GAGCCAATCTCTCCTCCCTCCTGGCATGCTTCCTCTCCCTGCTTGCCTTGCTCTTGGCGCGCTTGGCCTCAAACTGATCAGAGAGGGTCTTCTCTCTTGC
CTTCTCAGCCTTGGACTTGTGGATACTCTCCATGAGGACCCTCTTGTTCTTGAACATGTTACCCTTGACCTTCAGGTACATGTCATGGTACATGTGCTTG
TCGATCTTCTTGGCCTCACGGTACTTGCGCAGAAGGCGCCTCAGGACGCGCATCCTCCGCATCCACAGGATCTTGGTGGGGAGCCTAGCCTCCCTGGTAC
CCCTACGCTTACCATATCCAGAGTGACGGCCCTTCTGCTTGGCCTCATGTGCCCTCCTTGCACGAGACCTGGAGTGGATCTTCTGAGGCTTCCTGATGAT
GAAACCATCCTTTACCAGCTTCCGGATGTTCTGCCGGGAGTTGGCCATGGAGATCTCGTTGACCTCATTGGGGTCGAGCCAGACCTTGCCCTTGCCACAC
TTGAGGACGCTCGAGGCCAGGCGCTTCTGCAGCTTCAGCGACACCATCTTCGCCGCCGCTCTCCTCCTCCCTTACCTGCCCCTCGTGCCGAATT
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