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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25290  (registered. 2007)
Contig Information
Length 1506 bp
Clones 105 Clones [Download: TSV  ,  FASTA ]
Wh_KMP Shoot grown under continuous light 6
Wh_KMV Shoot grown with continuous light after cold treatment 6
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 2
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 6
Wh_V483 Shoot grown under cold condition for 3days 17
Wh_VABA Shoot with ABA treatment 31
Wh_VHS Shoot with heat shock treatment 17
Wh_VWD Shoot grown with dessication 15
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os11g0171300 [Oryza sativa (japonica cultivar-group)] >gi|78099750|sp|Q40677|ALFC_ORYSJ RecName: Full=Fructose-bisphosphate aldolase, chloroplastic; Short=ALDP; Flags: Precursor >gi|62732953|gb|AAX95072.1| Fructose-bisphosphate aldolase class-I [Oryza sativa (japonica cultivar-group)] >gi|108864046|gb|ABA91630.2| Fructose-bisphosphate aldolase, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113644566|dbj|BAF27707.1| Os11g0171300 [Oryza sativa (japonica cultivar-group)] >gi|125533557|gb|EAY80105.1| hypothetical protein OsI_35277 [Oryza sativa Indica Group] >gi|125576361|gb|EAZ17583.1| hypothetical protein OsJ_031792 [Oryza sativa (japonica cultivar-group)] >gi|215740860|dbj|BAG97016.1| unnamed protein product [Oryza sativa Japonica Group]
Score 936
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25290
CTGGCGCTTGAGATTGTTCATACTTAGGGTGGCAAACAAAGGCAACAATGCTCTAGAAAAACCATTCGAATACAGCAGTAAAACCATTCCAAAAGTTTTT
TACTTAGGGTGGCAAAACACAGTATATACTCTCCGTCCATCTCTTCCATCAGAGCTGGTCTCGACCTGTAACAACGACGACACACTGGCTGGCTAAGGTG
CCCTCAAGCTGCTCAAGGCGCTACTAGCACTCTCCCTCCATAGGTAGATAATTAGATAGATAGCTCGCCGACGGATCAGTAGCTGTAGTTCTTGACGAAC
ATGTTCTCGCTGGCTTCCGCGGCCTCGCCGTCGCTGGTGTACTTGCCGAGCTGCGCCAGGGAGTTGGCCTTGGCGCGCAGCAGCAGCGCCTCCTGCGCCG
CGGCCACGTTCTCCGGCCGCCCACCCCACGTCTTGAGGCAGGTGTTCTGGAGCGCCCGCGCGTAGGAGAAGGACACGTGCCACGGGTTCGGCGCCTGGTT
CATCGCGTTCAGGTTCAGCGTCGCCTCCACCTCCGACTGACCGCCAGACAAGAACATGATGCCGGGGACGGAAGGGGGGATCCTTCTCTGGAGGAGCTTG
AGGGTGTAGCTGGCCACTTCCTCGGGGGTGGCCCTGTCCTTGCACTCGGCACCAGGGGTCACCATGCTTGGCTTCAGGAGGATGCCCTCAAACATGACGT
TGTTCTGGGCCATGTAGTAGAAGGTCTCCGCCCACACCTTCTGCGCGACCTCGAAGGTCCTCTCGATGCCGTGCTCACCGTCGAGCATGATCTCAGGCTC
CACAATCGGCACCAGCCCATTGTCCTGTGAGATGGCCGCGTAACGGGCAAGACCCCAGGGCAGCTTCCTTGACAGCAAGCTCAGATGGGCCATTAGGAAT
GCTGACAACAGTGCGCCACTTGGCGAAGCGGGCGCCTTGCTGGTAGTATGCTGCTTCACGGGAGGCAAGGCCATCGAGACCTTGGCACCATGACTCATCG
TTGGAACCAACAAGTGGCACAAGACCCTTGTCAACCTTGATACCGGGAACGATTCCCTGCTCGACAAGGATGTCAACAATCTTCTTGCCATCAACAGTCG
ACTGGTAGAGGGTCTCCTCAAAGAGGATAGCACCAGAGATGTAGTTTCCCAATCCTGGTGGAGTGACAAGGAGGGTCCGGTAAGCCTGGCGGTTAGCCTC
AGTGTTCTCAAGGCCAATCGAGGCGAGTCTCTTGCCACAGGTGGCATTCGACTCATCCATGGCAAGGATACCCCTGCCTGGCGATGCGATGGTTTTCGCG
GTTTTGACAAGCTCATCGGCGTACGCGCTGGCACGGACAACCATGGAGACGGTCATCGGCTTGGGGGCGGCAGCCTGGCGCGTGGCGCCCCATTCGGCCT
TCTTGGGAAGGAAAGACGACTTGAGGAGAGTAGCAGACGCCATTGTTTCTGGAGGCAAGCAGATCAGGTGCTACCCTCTTCTTTGACACACCTTACAATT
GCAGCC
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