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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25148  (registered. 2007)
Contig Information
Length 1601 bp
Clones 68 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 4
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 8
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 10
Wh_V4816 Shoot grown under cold condition for 16days 6
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 6
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha >gi|170776|gb|AAA34306.1| translation elongation factor 1 alpha-subunit >gi|949878|emb|CAA90651.1| elongation factor 1-alpha [Hordeum vulgare subsp. vulgare]
Score 1548
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25148
TAAAAGTAGCAGCCTAACATTCCAAAGCAGAGGATAAAAATGAGTAGTCTCAGAAGCTTCCATGTTTTGTCAAAAGCCGAAATTAACGACAGTACTCAAA
TGACACATCAACAGGGCGCATATCACACGGCGCTAACAGTAGCAAAACTTAATAGGCACTAAACTACTAGAGATCTCAAAAAGCAGACATAGACGGATTC
AGGTAAACGCCTCATTTCTTCTTGATGGCAGCCTTGGTCACCTTGGCGCCAGTTGGGTCCTTCTTCTCCACACCCTTGATGACACCAACAGCCACAGTTT
GCCTCATGTCACGGACAGCAAAACGACCAAGAGGAGGGTAAGTGGCAAAGGTCTCCACAACCATGGGCTTGGTGGGAATCATCTTCACTATGCCAGCATC
ACCGTTCTTGAGGAACTTGGGCGCGGCCTCTATCTCCTTACCAGATCGCCTGTCAATCTTGGTCACCAGCTCAGCAAACTTGACAGCAATGTGTGAGGTG
TGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCAATCTGACCAGGGTGGTTCATGATAATGACCTGGGAGGTGAAGTTGGCTGCCTCCTTGGCAGGGTCAT
CCTTGGAGTTGGATGCAACAAAACCACGCTTCAGATCCTTCACGGCAACATTCTTGACGTTGAAGCCCACGTTGTCACCAGGAAGCGCCTCCAGGAGAGA
CTCGTGGTGCATCTCAACAGACTTGACCTCAGTTGTCAGACCACTGGGACCAAAGGTAACAACCATACCAGGCTTGATGACACCAGTCTCAACACGGCCA
ACAGGCACAGTTCCAATGCCACCAATCTTGTAAACGTCCTGGAGGGGAAGACGGAGGGGCTTGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGCG
CCTCAAGCAGGGTTGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCGAACCCAGAGATGGGGACAAAGGGAACCTTTTC
AGGGTTGTAGCCGACCTTCTTCAGGTAGGAAGAGACCTCCTTAACAATTTCTTCGTAACGTGCCTTTGAGTACTTGGGAGTGGTGGCGTCCATCTTGTTG
CAGCAGCAGATCATCTGCTTCACTCCAAGAGTGAAAGCAAGGAGAGCATGCTCAGCGTGTCTGGCCATCCTTGGAGATACCAGCCTCAAATCCACCAGTG
GTGGAGTCAATGATGAGAACAGCACAGTCAGCCTGGGAGGTACCGGTGATCATGTTCTTGATGAAGTCACGGTGACCAGGGGCATCAATGACGGTGCAGT
AGTACTTGGTGGTCTCGAACTTCCAGAGAGCAATATCGATGGTGATACCTCTCTCACGCTCGGCCTTGAGCTTGTCAAGCACCCAGGCGTACTTGAAAGA
CCTCTTGTTCATTTCAGCGGCTTCCTTCTCGAACCTCTCGATGACACGCTTGTCAATGCCTCCAAGCTTGTAGATCAGGTGGCCAGTGGTCGTCGACTTA
CCAGAGTCGAGCGTGGCCAATGACCACGATGTTGATGTGAGTCTTCTCCTTACCCATGGCTGGTGGGTAGACGTAAACTACCCAACCCGAAGAAGAAGAA
C
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