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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25134  (registered. 2007)
Contig Information
Length 1451 bp
Clones 66 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 4
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 3
Wh_EMC Dormant seed with cold treatment after water absorption 5
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_MS Seed DPA5 of DT3DL CS wheat 8
Wh_OKCS Seed DPA5 9
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 12
Wh_SHC Shoot grown with cold treatment 3
Wh_VHS Shoot with heat shock treatment 3
Wh_VSCB Liquid cultured tissue 8
Wh_VWD Shoot grown with dessication 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os05g0169100 [Oryza sativa (japonica cultivar-group)] >gi|122169494|sp|Q0DKF0|RL102_ORYSJ 60S ribosomal protein L10-2 (Putative tumor suppressor SG12) (Protein QM1) >gi|158513181|sp|A2Y0T4|RL102_ORYSI 60S ribosomal protein L10-2 (Putative tumor suppressor SG12) (Protein QM1) >gi|1293784|gb|AAA98698.1| similar to human QM protein, a putative tumor supressor, and to maize ubiquinol-cytochrome C reductase complex subunit VI requiring protein SC34 >gi|113578310|dbj|BAF16673.1| Os05g0169100 [Oryza sativa (japonica cultivar-group)] >gi|215694643|dbj|BAG89834.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215767618|dbj|BAG99846.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1085
Evalue 3.80928e-116
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25134
TTTTTTTTTTCTCAGATTGGAATTAACTTTTCATTGCAGCGAAACGAAACGATAGGAGTTACAACTAGAAGTTGGATCTCACTAGACAAACTACAGAAAC
AAGCATAGCCAGCGCACTGGATTCACGACGGGGGGGAGTAAGACTACAGAGCAAAGCAGGAAACAGCAGTGTCAGCCAGCGGCAGCGCGCTGATGGCGCT
CAGCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGGGCGTACACGACGTCCATGGCGGTGACGGTCTTGCGGCGGGCGTGCTCGGTGTAGGTGA
CGGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGACGCCGCGGGTCTCCTCGTAGATGAGCCCCGAGATGCGCTTCACACCGCCCCTCCTGGCCAG
CCTCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCCCGGAGCACCTTCCGGTGGCGCTTGGCGCCGCCCTTGCCGAGCCCCTTGCCGCCCTTGCCA
CGCCCAGACATCGCCGGAGATGAGATGGAAGCTGTCTACCACGAGAGATTTGGATTCAACAGGCGGTTCATATTAGTACCATCATCACAAAATAGATAAT
ATCTTCCATAACAAGGTTCGACACAACATTCAGACAAAATAACATAGCACCACAGGCACTTGGAATCTAAGTTCCACACAGTAAAATAAGTTCTGATAGA
ACGGATAGACTTCTTCTGCTAGATTATGCGGCAGACAGGAAAGCTTGTCCAGGGGCACGGTTCGCAAGGCGGCCATGGCATCCGAGCAGCTTAGCGTTGA
CTCCATCAGGCAAGATCCTGCCCTCACTCTTGAACTTGAGGTAGTCGTTGCGGTTGAACTTGGTGAAGCCCCACTTCCTGCTCTCAATGATCTTTTGGCG
GCCAGGGAACTTGAACTTGGCACGACGAAGGGCCTCAGTGGCATGGATGGCATTGTTGGGCTTGCACCGCACAGAAAGGAGGACCTGCCCAATGGCAACA
CGGGCACAGACTCCCTGCGGCTTCCCAAAAGCACCCCTCATACCAGTCTGGAGCCTATCAGCCCCGGCACACGAAAGCATCTTGTTGATACGGAGCACAT
GGAACGGGTGAACCCTGACCCTGAGGTGGAAGGCATCCTTTCCTGCATGCTTGGTCATGTACTTATTGCAAGCAATACGGGCAGCCTCAAGAGCCTCACT
GGACACATTCTCCTTCTCCCATGAGACAAGGTGAACACAGTGAGAGAACTCGTCGACACCCTTCTTCTTCATGCCAACATCATAGATCCTGATCTTAGGG
TCAGGCACACCACGGCAGTACCTTGACTTGGGGTACGGCTTGTTCTTGATCTGCCGATAGCACCTCGCAGGTCTTCTCCCCATGGCGACGGCGGCTCGAG
GCAGGCGGCGGCTGCGGCGGCGGCGGGAGGAGACGGAAGAGCGGCACGAGG
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