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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig23856  (registered. 2007)
Contig Information
Length 1109 bp
Clones 21 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 3
Wh_EMC Dormant seed with cold treatment after water absorption 1
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 1
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 4
Wh_PCDAM Anther at meiosis 2
Wh_VSCB Liquid cultured tissue 4
Wh_VWD Shoot grown with dessication 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0921600 [Oryza sativa (japonica cultivar-group)] >gi|75105692|sp|Q5JJI4|TOM20_ORYSJ RecName: Full=Probable mitochondrial import receptor subunit TOM20; AltName: Full=Translocase of outer membrane 20 kDa subunit >gi|57899435|dbj|BAD88373.1| putative TOM20 [Oryza sativa Japonica Group] >gi|113534760|dbj|BAF07143.1| Os01g0921600 [Oryza sativa (japonica cultivar-group)]
Score 682
Evalue 1.40755e-69
Total Hit Count 75
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig23856 
AAAATGCCAACAGACACCAATAGAGAGTATGAGATGAGCTCGTCAAAAGTCAATTACAAATTATTGGCAAACAAAAAGAATGATCACAGAAAGCAGGTAT
ATGCCGCTTATAAGCACATCAGTACTCAATACTGGTATTATCTAGGGCATGTGAAAAGGCCATAACCACAGCAATGGTTCCCGCTAACAAGAGAAGCGCA
TAAAGTAAGAAGCATATCCAGCGTCGTATGACAAGACAAACCTCATCAAGGCCCGCCGCATGTCGAAAAATTCCACAAAAAACCGCAACATGGAAACACC
ATTTCCTCTCCATAACTTTTGCTAAGTCCTAACATAGGCATGCCATTTGCAGGTTTCCCTTTTTCCAAGTCTCGTCTTGAATCACATGTTAGGCTGGTGT
GACATGTGAGGTGGTTGTGCCTCCTTGGCTTGACTGTTGGCCACTCCTAGCCAAACACCGATGCCAACGAGAAGAATTCCCCATCCAGCCAGATCATACC
AGAAGTCATTGTTCTTCTTCTTTTTCCTTGATTGCCTTGCATTTGAGGACGAGGGTGCTCCTTGTGAGGCTTGAGATGCGATTTGCCTATGGATCTCCAT
ATGCAGTTCAGGTGCCTTTGATGACAAATCCAATGACTTCCTGTACAACTCATTTGCTGGTTCCACATCAACAGCCCTCTGGAAACAACCAGTTGCTTTT
TCAAAGCATTCATTAGCCTGGACAGTTTCCGAAGTGAAGAATCCACGAGAGGTCAGGGCATTCCCCAAGCACCAGAGTGCATCAGCCTTGTTGGGATCAA
TTCTCAGTGCTTCATCCAGCTTAGACTCAGCATCTTCGAGGCACTTGAGGCTCTCAGGGCCGTTCTGCATCTGCGACAGCTCCAGCAGCGCGCCGCCCCA
TCGCGTCAGGTTGTCGGCGTCGAGCGGGTTCTCGTCGTAGGTGGACTTGGCGGTCTTGCAGGCGAGGTCGAAGAAGAAGAGCCTCTCCGGGTCGTTCATC
GCTGCCATGTCCATGGCGACGGCGACGGCGACGGCGAGATCCGGTGCGGCGGCGAGGCGGGGCGGTGCCGGGGGCTTACCTAGGGTTTTAGGCCTCGCTT
CGATTTGGG
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