Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig22678  (registered. 2007)
Contig Information
Length 487 bp
Clones 13 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_RDr Root of dessiccated seed 2
Wh_VSCB Liquid cultured tissue 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0172600 [Oryza sativa (japonica cultivar-group)] >gi|47497376|dbj|BAD19414.1| 40S ribosomal protein S30-like [Oryza sativa Japonica Group] >gi|51090595|dbj|BAD36047.1| 40S ribosomal protein S30-like [Oryza sativa Japonica Group] >gi|55773694|dbj|BAD72277.1| 40S ribosomal protein S30-like [Oryza sativa Japonica Group] >gi|113594981|dbj|BAF18855.1| Os06g0172600 [Oryza sativa (japonica cultivar-group)] >gi|118482205|gb|ABK93031.1| unknown [Populus trichocarpa] >gi|118483097|gb|ABK93458.1| unknown [Populus trichocarpa] >gi|118483320|gb|ABK93562.1| unknown [Populus trichocarpa] >gi|118484154|gb|ABK93960.1| unknown [Populus trichocarpa] >gi|118484319|gb|ABK94037.1| unknown [Populus trichocarpa] >gi|118487828|gb|ABK95737.1| unknown [Populus trichocarpa] >gi|195607768|gb|ACG25714.1| 40S ribosomal protein S30 [Zea mays] >gi|195610010|gb|ACG26835.1| 40S ribosomal protein S30 [Zea mays] >gi|195616154|gb|ACG29907.1| 40S ribosomal protein S30 [Zea mays] >gi|195617990|gb|ACG30825.1| 40S ribosomal protein S30 [Zea mays] >gi|195618464|gb|ACG31062.1| 40S ribosomal protein S30 [Zea mays] >gi|195619280|gb|ACG31470.1| 40S ribosomal protein S30 [Zea mays] >gi|195626382|gb|ACG35021.1| 40S ribosomal protein S30 [Zea mays] >gi|195639864|gb|ACG39400.1| 40S ribosomal protein S30 [Zea mays]
Score 314
Evalue 1.17628e-27
Total Hit Count 245
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig22678
TTTTTTTTTTGGAACAATCTAGACGCATATGTTGCACATCATGGGCAACGACAAACAACAAGCAAATTTAAGCCATGAACCCATACCACAATATCTCAGA
TTCTTCAACTAAGCAAAACATGCATACTTTAACACTTCAGTAATGTCTCTTCCATCATCATAATCTTGCGTAACAACAAACGAGAGGAAAACTAGCGCAA
AGGAAGAGCCTTTTTCTTGGCTCGGCGGTGCGGCGCGCCTACTTCTCGGAGGAGTTGGGGCCGCGCTTCTTGCCGAAGCCGACGACGGCGGTGACGAAGC
GGCGGTTGTACTGGATCCTCTTGTGGGCGCGGCCGCGGGGCTGCTTCTTCTTGTCCTGCTTCGCGACCTTGGGCGTCTGGCCGCGCACCTTCCCGGCACG
GGCGAGCGATCCGTGCACCTTACCCATGTCGACGGCGGCGGTGGGTTGGAGGGCGAGTGCGCGAGGGTTTGCGGCGGCGGCACGAGG
page-top