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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig22548  (registered. 2007)
Contig Information
Length 735 bp
Clones 13 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 2
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 1
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_OKCS Seed DPA5 2
Wh_SHDr Shoot grown with dessication 4
Wh_VSCB Liquid cultured tissue 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0962400 [Oryza sativa (japonica cultivar-group)] >gi|20140685|sp|Q94DM8|UFM1_ORYSJ RecName: Full=Probable ubiquitin-fold modifier 1; Flags: Precursor >gi|15289926|dbj|BAB63621.1| putative Ubiquitin-fold modifier 1 [Oryza sativa Japonica Group] >gi|113535009|dbj|BAF07392.1| Os01g0962400 [Oryza sativa (japonica cultivar-group)] >gi|125529215|gb|EAY77329.1| hypothetical protein OsI_05311 [Oryza sativa Indica Group] >gi|215765210|dbj|BAG86907.1| unnamed protein product [Oryza sativa Japonica Group]
Score 415
Evalue 6.38129e-39
Total Hit Count 75
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig22548
TTTTTTTTTTCTCCTCAGAAACAAATGAGATATCCAGAAGACCAGCACTGGTGTGCCAGGTGTATTTTCCTCTCTCGAAGCAGACGCTCCCTGATTTTTA
AGAGCATTACCAGGAAATCAGGGGCTGCAAACAAAGACAGCAACACATGGCACTGTCTGGCAAGCTATATTCATCCTGTCAATCATAGGGCTGGCTGGCT
GTTGATGGTAAATTACTCTCAACAAAGTTACATCCATTATACAACCGAGCATCGACATGCCTTTATTCCTGTTATATAGGTTCCTTCATTCATTGTTGAC
TCTAACAATGACGACTAGAAAGACGGCACCGTCGCTCCAACTCTGTCGCGGGGAATGAGGCGCAGCTCCGAGCCATGCTTCAAGAACACGTTGCCTGCAC
TTTGCTGTGGGTTGATGCCTACTCCATCGTTGGTGATGATGGCGCTGGTCTGGGGCGGGACCTTGAACTCCTCTGCGGCGAACTTGAGCACCGCGGTGAA
GGGCGCCGCCTCCGGCACGCTGAACACTTTGAAGGGGAGCTTGGGGTCGGAGGTGAGGATCACCTTGAACGACACCTTCCCCCCGCCTCCGCCGCCGCCG
CCCTCCGCCGCCGCCATGGGTGTGCTGTGGGTTGCCGATACGCCGCCGCCGCCTGGTGGTTCGCCTTGCCGGGGTCGCGTGATAGAATTTTGGTTCGGCC
GATGCGATGCGATGCGCCTCAGGAACCCAGCTAGC
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