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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21940  (registered. 2007)
Contig Information
Length 1443 bp
Clones 11 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 2
Wh_KMP Shoot grown under continuous light 2
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os04g0444600 [Oryza sativa (japonica cultivar-group)] >gi|38344536|emb|CAE02442.2| OSJNBa0027P08.4 [Oryza sativa (japonica cultivar-group)] >gi|38344584|emb|CAE02431.2| OSJNBa0058G03.7 [Oryza sativa (japonica cultivar-group)] >gi|113564465|dbj|BAF14808.1| Os04g0444600 [Oryza sativa (japonica cultivar-group)] >gi|125590511|gb|EAZ30861.1| hypothetical protein OsJ_014344 [Oryza sativa (japonica cultivar-group)] >gi|215694007|dbj|BAG89206.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1466
Evalue 2.49783e-160
Total Hit Count 403
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21940
GTTTCACACTGGATGGAAATCCCAAAGATATAACAGCACAAGTTCAACATACCAACCAAAGCAAGTGAGAGAACTAATGATTTATGTTTGGACAAGCTAG
TGTCGGTACATCCACCACATAAAAACAACAAATTGGTCCAGTTCATGAACAAGATGGATTTTTCTATGATCCAATATAACGACCAACATGCAAAATCAAG
TGCCAATATGCAGGATTACATGTCTTAAAGACAGCAAAGGAACTGAAAAGGCTGAACCCATACCAAACAGCCTATCACATGCTTAGCAACCTTCAAGCCA
TGATCTTAGCCGACCTCATGTAAAGACTGTCCACGACCTTTCCGACATTTGAAATGGTTTCTAGTGTAGCAGGGAAGATGGCCTCAGTCTTCTGATCCTC
AAAGATAATGAGGCAACCAGCACCTTGATCCAGAGTACCAGCAAATTTCTTGTCTAGAATCATCTGCGACAGCTTCTTCTCAACATCATCAACCGCCAAT
TCAATCATCTGTGCAACATGCCCAATCTCCACTCTCGAGTAGGGCTCAATCAACCTGCACAGATTCTGCTCCAGGAGGGTATCATACAAAGAGGAAAGAT
GCCTGTGAACAATAGGGTCCTCCTCAAGCTGGGCTTTGAAATCACGGAGGGCAGTTTCAAAGTACTTGAGAGATCTTTTAGAGTAGGCATCAGCTACAGC
TTTCATAGCATCAACATCCGGACCAACATACTTTAGGCTAGCCTTAGATGAGATTATTCCAGCAACATCATCAGCTTGGTTAACCATTATCTTGCACAAG
AGCATGTACTTCAAGCTGAAGATAGCTCTTGGGTCATCCAGTGCATTGAAAGCTTCAAATGCTTCAAAGAAGTAGCTGTAAGCAGTTTTGTAATCCTTTT
CTTCTGCGTGAAGGATTCCACTCTGCAGATCAATAGTGCCCTGCTGAGCTGGTGGAACATAGATGGCATTCGCCGCTGTCCTTGCAGCAGTCAACGAGGC
TTTGGCCTTTGGCAGGTTTCTCAGAGAGAAGTGGAGTTTGCTCTCCAACAGGTCTATGTCCACAAGGAGCAACTTGTCATCAAGTCTCCTGACTTCCTTA
ATAAGACCAGTAAGGAGAGTCAGGGCTTCAGTGTATTCCTTATTCTCTAGCAGAAGTGCCGCTAACCTTGCCTCCACACGCTGCCTAAGGAACGTACGCT
TCTCTGCACGGGTCCATTCCACCATCTCTTTGCACAGTGAGATCTGGAGATCAGATGTTCCAGGAATCTTGGAAACAGCATCAATGATTCCACGGACAAT
TTTCGCAGTCTTGGCCTTGGGAATCAGTGAGAAAAACGGCCTGAGCTGGGTCAAAAGGTTTCGCAGCTCCTCAGCTCTGCTCTCTTCAGTGAGGTAATTT
GTAAGGTTAGTAATTGCCAAGTTCTTTTGTTCTCAGTGCATCT
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