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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21662  (registered. 2007)
Contig Information
Length 1085 bp
Clones 10 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 2
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0896800 [Oryza sativa (japonica cultivar-group)] >gi|122222375|sp|Q0JGY1|RL51_ORYSJ RecName: Full=60S ribosomal protein L5-1 >gi|56785265|dbj|BAD82174.1| putative ribosomal protein L5 [Oryza sativa Japonica Group] >gi|113534614|dbj|BAF06997.1| Os01g0896800 [Oryza sativa (japonica cultivar-group)] >gi|169244415|gb|ACA50481.1| 60S ribosomal protein L5 [Oryza sativa Japonica Group] >gi|215737756|dbj|BAG96886.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1212
Evalue 4.74545e-131
Total Hit Count 440
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21662
GCGCCGCCTGCCCGCGCCGCCGCCGCCTCCTTCCGCAGGAGCTCCCTCCCCGCGGGCGCGATGGTGTACATCAAGAACCAGAAGACAAGGGCGTACTCCA
AGCGTTTCCAAGTCAAGTTCAAGAGAAGGCGCCAGGGGAAGACCGACTACAGGGCCAGGCTGAGGCTCACGAACCAGGACAAGAACAAATACAATACCCC
CAAGTACCGTTTTGTTGTGCGATTTACCAACAAGGATGTCACTGCACAAATTGTCTATGCTACCATTGCTGGTGATATCGTGATGGCCGCTGCCTACTCC
CATGAGTTGCCTCGCTACGGTCTTGAAGTTGGCCTCACCAACTATGCTGCAGCCTACTGCACTGGTCTGCTTTTGGCTCGTCGTGTGCTCAAGAACCGTG
ATCTTGATGAGGAGTATGAAGGCAATGTTGAGGCCACAGGTGAGGACTTCTCTGTTGAGCCTTCTGATGAGAGGAGGCCTTTCCGTGCGCTCTTGGATGT
TGGTCTTATTAGGACCACCACTGGGAACCGCGTGTTTGGTGCCCTTAAGGGAGCTTTGGATGGTGGTCTTGACATTCCCCACAGTGACAAGAGATTTGCT
GGTTTTAAGAAGGACGAGAAGTCGCTGGATGCTGAGATTCACCGCAAGTACATCTTTGGAGGGCATGTTGCTGACTACATGAGGTCACTAGCAGATGAGG
AACCAGAGAAGTTCCAAACTCACTTCAGTGAGTACATCAAGAGGGGAATCTCAGCTGATGACATGGAAGCAGTTTACAAGAAGGTTCATGCTGCCATCCG
TGCTGATCCCACCATGGCCAAATCAACCAAGGCGCCTCCCAAGACTCACAAGAGGTACAACCCCAAGAAGCTGACTTATGAGCAGAGGAAGGCCAGCCTC
GTCGAAAGGCTCAACGCCCTCAACAACTCTGCCGGTGCCGCCGATGATGACGAGGACGACGACGAGTGAAATGCGCTTTTGTTAGTGTCTGGCACCCTGC
ACAACGGACCTGTTCCTTTGAGTTTTGGTTATTATCTTGCTGGAGTTATAGATTGTGTTATCTGGATTATGTGCCCGTGCTGGCA
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