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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21453  (registered. 2007)
Contig Information
Length 1226 bp
Clones 10 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_SHC Shoot grown with cold treatment 3
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VABA Shoot with ABA treatment 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os12g0178100 [Oryza sativa (japonica cultivar-group)] >gi|88909670|sp|P0C0L1|APX6_ORYSJ RecName: Full=Probable L-ascorbate peroxidase 6, chloroplastic; AltName: Full=OsAPx06; Flags: Precursor >gi|77553821|gb|ABA96617.1| L-ascorbate peroxidase 6, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113648812|dbj|BAF29324.1| Os12g0178100 [Oryza sativa (japonica cultivar-group)] >gi|125535967|gb|EAY82455.1| hypothetical protein OsI_37672 [Oryza sativa Indica Group] >gi|215686471|dbj|BAG87732.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215708725|dbj|BAG93994.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1389
Evalue 1.70079e-151
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21453
TTTTTTTTTTTTTTTTTGATAGTATTGTTTTATATTTGTACCTTGAAGTGTCATACAACATGCAAGTATCATAAATGTTCGGTCCGGGAACTGTCCAATG
CTGCTTTTATTTCTGGTAATAGAGCACACAACTCAAAATACTGCTTCGGTGGATCCGAATTTGTTCACCTCGAAAATAGTTGCAAGAAACATAGCCTTGT
CATCTTCACTCACCAAAATGCAGTTCATCAGCAGCAAATATCAGCTAGTCTAGTGATACACCCTTAGGAGGGTCAAACTTAGACCCAAGATTGCTCAATT
TAGCATGAGCTTCAGCGTAGTCTTCAAAAAATGTATCCTGATCCTCAGCATACTTTTCGGCATAAATCTTGAATGATGGATCCTCAAAGAGCACAGCATC
AGTGGGCAGAACTAGAAGGTCCTCGTCTCGTCGTTCTTTGACATGCTTGAAATAGCTGTTATCAAACTTGAGCCACTGTGATGTCCAAGATTGACCCCCA
GGTGCACCAGGTCCATTTTTAGTGTATTTTGTTTCAGGTTTACCCCAGCCGCTGCGCTCTGGTCTTGATCGTCCAAGTGTGTGTGCTCCTGACAATGCAA
CAATTTCCTTGTCATTCAGGCCCATTCTGTAGAATACTTCTCGCAAATGTTCAGCAGGTGAAGGCGGACCAGCAGCAGGGAGTCTCCCCTCTGGTGGGCA
CTGTTCAGGGGCAGAAACATCAACCCTTCCATAGATCATGGGGATTTTGGGGCCACCGGCTTCCTCAACGGCTGTAGCACTGGCAAGCTGAAACAGATCC
GCATAAGTAACACATGCATATTTTTCCTTGATGGCTTGAATAAGTTTCAAAGCATTCACAAGACCAGCATTAGCCGCATGCTTTAACTCAATTTCAAACC
TCAAGCTACCATTAGCTCCACCACACTTGGGCCACTCACTAATGTTCTTATCATAAGTACCAGCGTCATGCCAACCCAAGCGAACCAGGATGGGATGGCA
GGACTTCTCCTTCAGCAGCTGCTTGACGTCCTCCCGCGCGCCCCTCAGCTCAGCCACCGCGTCCCCGGCCGCCGCCGAGCTAGCCTGACGCCGCCCGAGC
TCCTGCGATACGAGGAGGAGGCCCCGCAGAGGGTGGAAGGGAGACCCACCAGAGATCCCGCGGCGGAGGAGGTGGTGGACGGCCATGTCGGCTTCGGCGG
CGGGGGGACGAGGGTTTAGGGGTGAT
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