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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig20089  (registered. 2007)
Contig Information
Length 1724 bp
Clones 8 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0111500 [Oryza sativa (japonica cultivar-group)] >gi|19569141|gb|AAL92029.1|AF486280_1 cytosolic 6-phosphogluconate dehydrogenase [Oryza sativa] >gi|7363280|dbj|BAA93024.1| putative phosphogluconate dehydrogenase [Oryza sativa Japonica Group] >gi|113594626|dbj|BAF18500.1| Os06g0111500 [Oryza sativa (japonica cultivar-group)] >gi|125595798|gb|EAZ35578.1| hypothetical protein OsJ_019061 [Oryza sativa (japonica cultivar-group)] >gi|215686886|dbj|BAG89736.1| unnamed protein product [Oryza sativa Japonica Group]
Score 2327
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig20089
AATGGCAATGTCTTCCCTCCAGGGTTGATCAATCACATGGAAGTAGCGGAGACTGGAGAGAATATGTGATCTCCTTGTAGAAAATAAATACAGGACTCGT
TACTCAAATAATAAAAATTAAACGGCGGTTCCTCCCCTACAGGAAAAGGACTCATGACTGGCAGCAACAAAGGATACCGGAAAGACGAAACCTGATGGAC
CGTCTCTTGGTAGAGCAGCAGCAGCATCTTAGATCTTTGAGTTGGCAATCTTGTACCACTCGGTGTGGAAGGAGCCGGGCATGTCAACCCTCTCGTAGGT
GTGCGCCCCGAAGTAGTCCCTCTGGGCCTGGACGAGGTTGGCAGGGAGCCTGTCCCTCCGGTAGGAGTCGAAGTAGGCCAGACTCGCGGACATGCCAGGG
GTGCTGACGCCGTTGTTGATGGCGAGGCAGACAACCCTCCTCCATGCAGCTTGCCTGTCCATGATCTCCTGCGCGAACTCGGGGTCGATGAGAAGGTTGG
CGAGCTCACCGTTCCTGTCATACGCCTTCTTGATGCGGTCCAGGAAGCTGGCGCGGATGATGCACCCGCCCTTCCAGATCCTGGCCAGCTCGCCGAGATT
GAGGCCCCATCCCTTCTCCGTGCTCTTGGCCTTGATGATGTTCATGCCTTGGGCGTAGCTGCAGATCTTGGAGGCGTAGAGGGCCTTCCTCACATCCTCG
ATCAGCTGTGCCTTGTCGACAGTTTCACCACTGGAGTAGTCACCCTGGAAGATCTTGGAAGCCGCGACACGCTCATCCTTCAGCCCGCTGAGGAACCTGG
AATCCAAGGACGCCTCAATGGTAGGAGCAGCCACAGAGAGCTCAGCAGCTTGCTGCACTGTCCACTTCCCGGTTCCCTTCATCCCGGTCTTGTCCAGGAC
CTTGTCGACCAAGTAGCCCTCACCCTGGTCATCCTTGATGCTGAAGATATCAGCAGTGATCTCAACCAAGAAACTGAGGAGTTCACCCTTGTTCCACTCC
GCGAAAACCTGCTGCAGCTCACCGTTTGTGAGCTTCCCAACCGACTTGAGAACGTCGTACGCCTCAGCAATGAGTTGCATGTCACCGTACTCAATGCCAT
TGTGAACCATCTTGACAAAGTTTCCGGATCCACCCTTCCCAATGTATGTGACGCACGGGCCGCTGTCAGGGACCTGAGCAGACACCTTGAGAAGAATGTC
TTCAATGTACTGGTATGCCTCCAATGAGCCTCCAGGCATCATGGAGGGGCCATGGCGGGCACCCTCCTCTCCTCCGGAAACACCCATCCCGAGGTAGAGG
AGTCCACGCTCCTCCATCGCCTTCTCCCTCCTTTCCGTGTTCTCGTACCACTCGTTTCCTCCATCAACGATGCAGTCGCCCTGCTCCAGGTGTGCTGCGA
GCGTTGCGATGGTCTGGTCAACAGGAGCACCGGCCTTGACAAGCATGATGACGACACGTGGTTTCTGAATGGAGTTGACGAAGGATGCAGGGTCATGGAA
ACCGTAGAGAGGAAGGTTTCCTTCTAGCTTGGCGCGCTGAACAGTCTCATCGACCTTGGAGGTGGTCCTGTTGTAGACAGAGATGGGGAACCCTTTCTCT
GCAATGTTGAGGGCAAGGTTCTGGCCCATGACGGCGAGGCCGGCAAGACCAATTCTGGTGAGAGCCATCTTGTACCTGCGCCTGCCTTGGATGAGATCTG
CGTGGGTCTAGAGCAAGGGCGATG
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