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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig18716  (registered. 2007)
Contig Information
Length 706 bp
Clones 6 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0284600 [Oryza sativa (japonica cultivar-group)] >gi|47847708|dbj|BAD21487.1| putative 60S ribosomal protein L27 [Oryza sativa Japonica Group] >gi|47848339|dbj|BAD22201.1| putative 60S ribosomal protein L27 [Oryza sativa Japonica Group] >gi|113536101|dbj|BAF08484.1| Os02g0284600 [Oryza sativa (japonica cultivar-group)] >gi|125538995|gb|EAY85390.1| hypothetical protein OsI_06769 [Oryza sativa Indica Group] >gi|125581675|gb|EAZ22606.1| hypothetical protein OsJ_006089 [Oryza sativa (japonica cultivar-group)] >gi|215768337|dbj|BAH00566.1| unnamed protein product [Oryza sativa Japonica Group]
Score 702
Evalue 3.0854e-72
Total Hit Count 326
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig18716 
ACCCACTCGGCGGCGGCGGAGCACGCGAAGATGGTGAAGTTCCTGAAGCCCGGCAAGGCGGTGATCCTTCTCCAGGGTCGGTTCGCCGGCCGGAAGGCGG
TCATTGTGCGCGTTTTCGAGGAGGGCACACGCGACCGCCCCTACGGCCACTGCCTCGTCGCCGGCCTAGCCAAGTACCCCAAGAAGGTGATCCGCAAGGA
CTCGGCCAAGAAGACGGCCAAGAAGTCGCGCGTGAAGTGCTTCCTGAAGCTGGTCAACTTCACCCACATCATGCCCACCCGCTACACCCTCGACGTCGAC
TTCAAGGACGTCGCCTCCGGCGGGCCCGACGCCCTCGCCACCCGCGACAAGAAGGTCGCCTCCTGCAAGGCCGCCAAGGCACGTCTCGAGGAGAGGTTCA
AGACCGGCAAGAACAGGTGGTTCTTCACCAAGCTCCGCTTCTAGGAGCAGAGTCTTTACAATACTAGTAGTTCCTTGTTCTTGCAATCAATAGCACACTG
AACTATCTCTATCACTGTTTTTGTATTGTCCATGAGGATTTTGTGGTTAGTATGGATCTCGGAGAGAGTTTAATTAAGGCATGAGCGATGATGATGTTCC
ATGTGTTAAATCAAGCTAATGGTTGCACATGGTTGCGATTTTGTTAGAGCTTACTCCCTGTGCTGTTTATTCCCCCAATTCTTGTAACTATATTGTTGGT
CTGTTG
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