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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig18491  (registered. 2007)
Contig Information
Length 940 bp
Clones 6 Clones [Download: TSV  ,  FASTA ]
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_VABA Shoot with ABA treatment 2
Wh_VSCB Liquid cultured tissue 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os05g0458100 [Oryza sativa (japonica cultivar-group)] >gi|52353447|gb|AAU44015.1| putative peptidylprolyl cis-trans isomerase [Oryza sativa (japonica cultivar-group)] >gi|76057837|emb|CAH55766.1| peptidyl prolyl cis-trans isomerase [Oryza sativa (indica cultivar-group)] >gi|113579294|dbj|BAF17657.1| Os05g0458100 [Oryza sativa (japonica cultivar-group)] >gi|215686485|dbj|BAG87746.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218196920|gb|EEC79347.1| hypothetical protein OsI_20211 [Oryza sativa Indica Group]
Score 700
Evalue 8.83869e-72
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig18491
CTCGTGCCGATCCAGATCTGTCTATCATCGTCGCTCCCTCCACTCTGAATTCCCCTCCCCTTCTCTCGGTGAAGGTCCTCACCGGCGCCCCCGCTGCCAC
GGCTCTCTCTCCAAATCGTCGCCGATCCGAGAATTTCCATTCAACAGCAAGGTCATGGCAGAAACCATTGATCTAACAGGGGATGGAGGCGTTCTTAAGA
CGGTGGTCAGAAAAGCAAAAGATGATGCTATAAGCCCATCTGACAGCCTTCCATTGGTTGATGTTCATTATGAAGGGACACTTGCTGAAAATGGCGAAGT
TTTTGACACCACACATGAAGACAATTCTATTTTTACATTTGAAGTTGGCCAGGGAGCTGTCATTAAAGCATGGGACATAGCCTTAAGAACTATGAAAGTT
GGCGAGATTGCAAAAATAACATGCAGGCCGGAATATGCGTATGGAAGTCCAGGCTCGCCACCAGAGATACCAGCCAATGCAACACTCATTTTTGAGGTGG
AATTAGTGGCTTGCAAGCCAAGGAAAGGTTCAAGTCTGGGCAGTGTATCTGATGAGAAAGCCAGGCTAGAGGAGCTTAAGAAACAGCGGGAGCTGGCAGC
TGCCACCAAAGAGGAAGAGAAGAAGAAGAGGGAGGAGGCAAAGGCCGCGGCAGCGGCTCGTGTGCAAGCCAAACTTGACGCCAAGAAGGGCAAGGGAAAA
GGAAAGGGCAAATAGATTACTCCCAACTGATGTATTAGTAGTTGCATTTGCTGCTGAGTGCCGACTGTTGTAACCTACTCCCTCCGTCGCATAAAAGAAA
ACATCTTACATTGTGGGACGAAGTAGTACGGAGTATAAATTAATCTGCACAAAGCATCAGACTGCGAGAAGATTGCTTGTTGGCTACTGTGCTTTGGGGG
ATGCCGTATGCTGCCCAGCACCAGCCTTACTGAAAACATA
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