Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11304  (registered. 2012)
Contig Information
Length 940 bp
Clones alternative view 175 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 7
Wh_e Seed DPA10 7
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 6
Wh_oh Pistil at heading date 3
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 5
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 10
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 12
Wh_OKCS Seed DPA5 7
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 2
Wh_VHS Shoot with heat shock treatment 6
Wh_VSCB Liquid cultured tissue 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 8
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 9
WH_XR Roots, 18 day old plants were grown hydroponically 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_SP 6
WH_XA Root 6
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 6
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 9
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242055755|ref|XP_002457023.1|| hypothetical protein SORBIDRAFT_03g047300 [Sorghum bicolor]
Score 256
Evalue 3.00E-66
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11304
ATCAATCAATTCCGCTCCCCCTCCTTGGATCCAACCCCCAAACCCCATCCATCACTCTCGCCTCGCTTGACTCCTCCTTGGAAGCACAGAGAGAGAGGAG
AGCATGGCGTCGTCCGGTGGCAAGCTCTTCACCCTGGAGGAGGTCGCCAAGCACAGCTCCAAGGACGACTGCTGGCTAGTCATCGGCGGCAAGGTGTACA
ATGTGACCAAGTTTCTCGATGACCACCCTGGAGGCGACGACGTCTTGCTGTCTTCAACAGCCAAGGATGCGACCGACGACTTCGAGGACGTGGGGCACAG
CACGACCGCCCGGGCGATGATGGACGAGTACTACGTGGGCGAGATCGACGCGACCACGATACCCACCAAGGTCAAGTACACGCCGCCCAAGCAGCCGCAC
TACAACCAGGACAAGACCCCCGAGTTCGTCATCAAGATCCTCCAGTTCTTGGTCCCCCTCGCGATACTGGGCCTGGCCGTCGCCGTACGGATCTACACCA
AGGCGGAGTCTGTCTAGCACCGTCGTCTTATACCAGTCAGTCAGTCAGTCATTCGGAAGTGTCCAAGAGCTGAATAAGTTTTAGTGGGGATTTGCATATT
TTGTGTACCAGCGTCACCGTCCTGTCATGGAATCTGGGAACTGCTCTCGACCCGTCGTTGCGTTATGGTTCTACTGACGTCCGCTGTTGAAATCGTGACT
CGGGAAAAACGGATAGATACTTGGCTATATTTTCCATATCGCTGGTGAATGTTCAGACATACATATTCTTAATTTGATGTGATTAGTTGTGTATGTGTCA
AATTGTTTGTGCCCCTTGTTCGACAGTCTCGGTTGTCACACTGAATGGCCTGTAGGCGCACCAAATTTGTACTGCTGTTGCAGTAGCAGGGCTACATCTT
GCACAGAAATAAAAGGCAAATTGACATGTTAAAAAAAAAA
page-top