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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11260  (registered. 2012)
Contig Information
Length 821 bp
Clones alternative view 10 Clones [Download: TSV  ,  FASTA ]
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 1
WH_XN Leaves, plant was grown at constant 23℃ 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|8926334|gb|AAF81798.1|| putative tyrosine phosphatase [Oryza sativa Japonica Group]
Score 365
Evalue 2.00E-99
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11260 
ATATTTCCTGTACATGGCCTTTGCTTTCCGAATGGAGGATTGCCATTGTTATGTACAAAGTGTATGTTCATAGAATGGTTGAAGTACAAAGGAAGGCTTA
AAACATTCCTGGAGATATCTCCAAGTCTCAGCAAGAACAAACTAAAACTAAAACTGCAAGACCAAGTAGATGTGTGCAATCGATAGGAGGTCATCACTTC
TTACCGAATCCAAATATGGATTTGATAGCATTGATGGCGTTCTCGTTGATAAATGATTCATCGTACTTGTTTAGTAGGGTGGCGAACTCCTCCGAGTTCC
TCAAGTTTGCTAAATCCGGGTCGGTGCGAATCCTCTTGAAGTCTTCATAGCCTGCTTTCATCGCTTCTTCAAGTGCAGAAAGACCAGCTTGTATCCGGTC
GAGCTTTGAATAACAGCACGCGACATTGTAGCTGGCTACGGAAGCTTCATCAATCTCTGGTTTTGACCCCAGCACCGACTCGAACTTCTCCAACGCCTCC
TCGTATTTTCCATCCTTGTACAGCTTTAGCCCCATGCGAAGGTCATCTTCTCTTTGGATCTTCTGCTCCATCTTCTTCTGGTAATTTTGCATCTGAATCT
CTCTGAGTTTAGTGCTGACATTTCCGGTGTTCCTTTCAGCCCTGATGACCTCCTTGTCAGAGAACTCAGCAGCACCGTCCCATTTCCCAAATTTCTTCTG
CATCTTCATGTAGAGAGGGCCAACTCGCTGGCGGATGCAGTACATGGTCTGGCCGTACCCTGCCGCCGGCCNNNNNTCCTCTCCAAAAACGGCGCTGGTG
GCAATAACCTTGTCGCCGACG
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