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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig10692  (registered. 2012)
Contig Information
Length 1547 bp
Clones alternative view 208 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 3
Wh_h Spike at heading date 3
Wh_oh Pistil at heading date 2
Wh_r Root 5
Wh_yd Spikelet at late flowering 6
Wh_CSEC Callus 12
Wh_DPA20 Seed DPA20 3
Wh_EM Dormant seed with water absorption 7
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 5
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 7
Wh_VWD Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 5
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_SP 1
WH_XA Root 12
WH_XB Root 24
WH_XC Root, treated at 50 microM Al for 6h 16
WH_XD Root, treated at 50 microM Al for 6h 22
WH_XF Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XV Leaves, plant was grown at constant 23Ž 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|399414|sp|Q03033.1|EF1A_WHEAT|EF1A_WHEAT RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
Score 899
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig10692 
TTTTTTTTTTAACAAGTTGCAATCTAATAACTTGCATTTCACAACAAATCAGTCTCAAGGCACAGGAGTTTAGCCGAAGCAGGAATAGAAATACAGTAAT
TAAACGACAGACAGGATCATTGCTCGCCCGGGATAAGAGTCTGCAGCAACAAAAGCAATGACCATGAACAAAAACCTTCTGCTAGATAGATGCCTATTTC
TTCTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGGGGTCCTTCTTCTCCACGCCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCACAG
CGAAGCGGCCAAGAGGAGGGTAGGTGGCGAAGGTCTCCACAACCATGGGCTTGGTGGGAATCATCTTCACGATACCAGCGTCACCGTTCTTCAGGAACTT
GGGCAGCGCCTCCAGCTCCTTACCAGATCGCCTGTCGATCTTAGTCACCAGCTCAGCAAACTTCACAGCAATGTGGGAGGTGTGGCAGTCCAGCACTGGG
GCGTAGCCGTTGCCGATCTGACCAGGGTGGTTCATGATGATGACCTGGGAGGTGAAGTTGGCTGCCTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAA
CAAACCCACGCTTCAGATCCTTAACAGCAACGTTCTTCACGTTGAAGCCAACATTGTCACCAGGAAGCGCCTCCAGGAGGGACTCGTGGTGCATCTCAAC
GGACTTGACCTCAGTTGTCAGACCAGTGGGACCAAAGGTAACAACCATACCAGGCTTGATGACACCAGTCTCAACACGGCCAACAGGCACAGTTCCAATG
CCACCAATCTTGTAAACGTCCTGAAGGGGAAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCAAGAAGGGTAGGGC
CCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAAACCCAGAGATGGGAACAAAGGGAACCTTGTCAGGGTTGTAGCCGACCTT
CTTCAGGTACGAAGAGACTTCCTTGACAATTTCCTCGTAACGGGCCTTTGAGTACTTGGGAGTGGTGGCGTCCATCTTGTTACAGCAGCAGATCATCTGC
TTCACTCCAAGAGTGAAAGCAAGGAGGGCATGCTCACGGGTCTGGCCATCCTTGGAGATACCAGCCTCAAAACCACCAGTGGTGGAGTCAATGATGAGCA
CAGCACAGTCAGCCTGGGAGGTACCAGTAATCATGTTCTTGATGAAGTCACGGTGACCAGGAGCATCAATGACGGTGCAGTAGTACTTGGTGGTCTCGAA
CTTCCACAGGGCAATATCAATGGTGATACCCCTCTCACGCTCGGCCTTCAGCTTGTCAAGCACCCAGGCGTACTTGAAAGACCTCTTGTTCATCTCGGCG
GCTTCCTTCTCGAACCTCTCGATCACACGCTTGTCAATACCTCCAAGCTTGTAGATCAGATGGCCAGTGGTGGTCGACTTGCCAGAGTCGACATGGCCAA
TGACCACGATGTTGATGTGAGTCTTCTCTTTACCCATGGCTCCGAGG
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