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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig10677  (registered. 2012)
Contig Information
Length 1085 bp
Clones alternative view 54 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 2
Wh_f Spike at flowering date 4
Wh_oh Pistil at heading date 4
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_SHC Shoot grown with cold treatment 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_SP 6
WH_XA Root 5
WH_XB Root 4
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115483941|ref|NP_001065632.1|| Os11g0127900 [Oryza sativa (japonica cultivar-group)]
Score 284
Evalue 1.00E-74
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig10677
CTATCAGATCAACTAAAATTCACGCGCAAACAGGTCCAAGCAATTAAGAAAACTTTATCTGAACGTCCAGTCTCATCATTAACATAAGATAAACATAGCA
TAATCCCTTTAACTAGGCATGAAGCAAAATGATATTGCACGGGCACCTCACAATCCATTTCATTGACCAAAAGATAGGAAACTACTAGCCGCAAAAGGTA
GATAGATAAGTAGACAAGCAGTACGCCACCACCGCCATACCCAAGAGGACTTCTCGCAGGAGATCAACGGTAAGACTTCTGGAAACGCGCGCGGGCGCCG
CGACCGCCGAACTTCTTGGGCTCGCAGCGGCGCGGGTCGGCGACGAGGAGCGTCCGGTCGTAGCGACCAAAGATCTCCTTCACCTCCTTCTTGGCCGCCT
CGTCGACGTACTTCTGGTAGTAGGCGACGAGCGACTTGGCGATGGCCTGGCGGATGGAGTAGATCTGGCTCGTCTTCCCGCCGCCGCGGACGCGAATCCG
CATGTCGATGTCCTTGAAGCGCGACCTACCGGCGAGCAGGATCGGCTCGAAGGCCTTGAGGCGGAGCATCTCGGGGCGGATGAGCTCGATGGGCGCGCCG
TTGACCTTGATGAGGCCGCGCCCGGGCTTGCAGTAGGCCACGGCGACGGCGGTCTTCTTCCGGCCGAAGCACTGGACAGTGCCAGGCGTCGGGCGAGTGA
GAACGGCTGCCATGGTGTCTGCGGCCGTGTGCTTGGTTGCTGTGAGGGCGGTGGTGTGCTTGGTTGCTGTGAGGGCGGTGGTGTGCTTGGTTGCGGCAGT
GCGGCGGCGAGGCGGCGCGAAGCTCTTTTCTACTGTTAATAGAGACTACAATTATGTATAAATAAAATAACTACATAATCAGTAAACCAAGCATCAGTAC
ACCTAAACTCAATTACAACTACAGAGCTGTCACCTGAGGATTAACCACTAACAACAACCTAGAATGACGAACTTATCAGTAGCTGTGCTACATTGCCAGG
AATCAAAACCAGACAAGCCATTGCTTCAGTATTCTCTCACCCCTTTGATACATCCAGACAAGGGAGTAAATATCTGTGTCTGCCA
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