Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig10665  (registered. 2012)
Contig Information
Length 2637 bp
Clones alternative view 220 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 3
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 3
Wh_oh Pistil at heading date 2
Wh_r Root 10
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 13
Wh_KMV Shoot grown with continuous light after cold treatment 6
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 9
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 3
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 8
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 6
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 5
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 7
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 10
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XA Root 8
WH_XB Root 19
WH_XC Root, treated at 50 microM Al for 6h 12
WH_XD Root, treated at 50 microM Al for 6h 16
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 8
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|68655495|emb|CAJ01713.1|| methionine synthase 1 enzyme [Hordeum vulgare subsp. vulgare]
Score 1493
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig10665
TTTTTTTTTTTTGGAGAAATTTTGTAATTTGAAACATAACGTAACAAACTCAAGACTTAGATGAACAATTCGCCACTCAGTTTACAATACACACCGACAA
ACCGCCTCAAAAACCACCAAATCAAGGGATGAGCACATGGCGCCGAGAAACAAACTAGCCTAGCCAACAAGTGGATACGAGACCCAGATTATTCAAAGTA
AACACGGCTATGGTGGTGACATCCTCCTTGCAATTAAAAGGGGGGCTCTGCTATACGAGCACGGCTTACTGCGCCTTGGCGAGCTCGGCACGGATCTGCT
TGGCGGCCTCAACCATGTTGGTGAGGGCAGGCTTGACCTCGGCGTACTTGCGGGTCTTGAGACCGCAGTCAGGGTTCACCCACAGGATGTTGGTGTCCAG
GACCGCGAGCATCTTGTTGACACGGTCGGCAATCTCCTCCTTGGACGGGATCCTGGGGGAGTGGATGTCGTACACACCCGGGCCAATGCCAGCACCGTAC
ACCACACCCTCGCGGAAGACGGACAGAAGCTTCTCGTCGGACCGCGAGTTCTCGATGGTGATCACATCAGCGTCCATGTTGATGATGGACTGGATGATGT
CGTTGAAGTTGGAGTAGCACATGTGGGTGTGGATCTGGGTGGTGTCCTGCACACCGCAGTTGGTGATCCTGAAGGAGTGCACGGCCCAGTCCAAGTAGAA
AGCATGCTCAGACTTGCGGAGTGGCAGACCCTCTCTCAAAGCAGCCTCGTCAATTTGGATGACCTGAATACCACCAGCCTCAAGGTCCTCGACCTCCTTC
TTGATTGCAAGAGCAATCTGGTAGCAAGTCTCAAACCTCGGTTGGTCATTTCTAACAAAAGACCAGTTAAGGATTGTGACAGGGCCTGTCAACATTCCCT
TCATTGGGCGAGCAGTCATGCTCTGTGCCATCTTGGACCAGAACACAGTCATGGGGTTGGGGCGGCTCACATCACCGTAGATAATCGGTGGCTTGACACA
CCTTGATCCATAAGATTGCACCCAGCCATTGGCAGTGAATGTGAAACCAGAGAGCTGCTCACCGAAGTACTCAACCATATCGTTCCTCTCTGGCTCTCCG
TGCACAAGCACATCAATGTCAAGCTCTTCTTGGATCTTAACAACCTTGCTAATTTCCTCCTTGATGGCATTGGTGTACTCCTCCTCAGAGATCTTCTTTG
CCTTGTACTCACGGCGGACTCTCCTGAGCTCCACGGTCTGTGGGAATGATCCAATGGTGGTCGTGGGAAGGACCGGAAGGTTGAGCTTCTTCTGCTGCGC
ATCCAACCTAGCGCTAACGGTGGTAGCACGGCGGTGATCAGAGCCCTTGAGGGCAGTAGCAGCCTTCTGGACCTCCTCATTTGTGACACGTGGTGACGAC
CTTCTTGAGGCCAGAGCAGCAGCATTTGCTGCAAAGTAAGCCTCATCCTTTTGACCAGCCAATGCCTTGGCAAGGGCGTTCACCTCAACGACCTTTTGGG
CGGCAAATGCGAGCCATGACTTAATCTCATCATCAAGCTTGGTCTCATTTACAAGGTCCACAGCAGTGTGCATGAGTGAGCAGGAAGTCGATACGACAAG
CTTGTCCTTCCCAACAACAGCCTCAAGAGACTGAAGAGTGGCGAGAGATGCAGCAAGGTCATCAGCCCAAATGTTGCGTCCATCTACGACACCAGCAAAG
AGGTACTTTCCAGCAGGGAAACCACTCTTGACAAGCTCAAGAGTCTTGGTTCCACGTTCAAGGTCAAAACCATAAGCAGTCACACTGCTCAATGATGTAA
GAGTCTTGTACGAGTCTGCGGGAACATCAGCGAAGTAGGTCTCAACAAGAACGTTCAATCCAGAAAGTGCGGACTCAAGTTCTGCGTAAGCTGCAGAGAA
TGCAGACAATTGGTGGGATTCAAGGTCCTTAACAAGGGTGGGCTCATCAAACTGAATCCATGAAGCGCCAGCTGCCTTCAACTCAGCAATAACCTCCTTG
TAGACGGGAAGGATGCTGCTAAGAAGGGAAAGGGGAGAGAATGATTTCTCTACACCCTTGGCGGCCTTTGAGAGCAACAAGTATGAGACTGGTCCAACAA
GTACTGGGACGGTATCAACGCCAAGCGCCTTAGCCTCCTTGTACTCATTGATAGCCTTGTGAGAAGAGTAGGAGAACTTGGTGCTAGGAGCCAATTCAGG
GACGATAAAGTGGTAGTTGGTGTCGAACCACTTGGTCATCTCCATAGCAGGGACGGTGGCGTTACCCCTAGCCATCGAGAAGTAGGTGCTCAAATTGATC
TCCCCACCGGTCCATGAGTAACGGTCTGGGACGGCACCGAGCATGGCGGTGGTGTCAAGAACCTGATCATAGTAGGAGAAGGTGTTGCTGGGGATGTACT
TGATCCCAGCATCAGCCATCTGCTTCCAGATGCTGGCCCTGAGGTCGGTGGCAACCTTCTCCAAATCCTCGGCGCTGCTCTTGCCATCCCAGAAAGACTC
CAGGGCAAACTTGAGCTCCCTCTTGGGGCCCATGCGCGGGTATCCGACAATGTGGGACGCCATCTTTCCTGGGTGCGCGGAGGCGGAGGGGGACGGCGGC
GAGCAACGGGGAGGAGGAGGAGGAGGGCCTCGTGCCG
page-top