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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1060  (registered. 2012)
Contig Information
Length 710 bp
Clones alternative view 64 Clones [Download: TSV  ,  FASTA ]
Wh_SH - 2
Wh_EMI Dormant seed with water absorption after breaking 10
Wh_RDr Root of dessiccated seed 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 9
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 6
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1129142|emb|CAA55482.1|| ORF1 [Hordeum vulgare]
Score 180
Evalue 1.00E-43
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1060 
TTTTTTTTTTTAGAACAAAGAAAACGCTGGATTCTTTCGTTATTATTACTAGCTGTAAATAAAAGTAAAAGGTACAAGCCCTGCTCGACGAGAGATACAT
CTGATCTGAGCACACCAACACTATAGCAGGGCATCCAAGCCCAGACGAACGCACGCACACAATGGGAAACATCCAACCCGCACCTCCCCAGTAGTATAGG
ATCGATCATGATGATGATCCGTCGTTAAGCCGCGTCGCGCGCAGCGCTCGGCGAACGAGCGCCGCCTGCCTCTTCCCTCGTTACCTAGCATAGCAGTTTT
CCTTCCATGGCGGGGCCAGGAGGGTCGTCGAGCGGGGCTTCAAGCCCGTGCGTAGGTCTGTCCGAGGTGCGCGGCGCGGAGGTCGGCGGGGTCGGCGCCG
GCGGCGCGGTTGGCGGGGCGGTAGTGGCCGGTGACGGGGTCGGGCACCCACGAGGCGTCGGCCGCGGCCTTCTCAGCCTCCCTGGCCGCCTTTCCGTCCG
CGGTCGCCGCGGCGCCGCGCCTCATCGCCCCGGAGGAGGCCGCCGCCGCGTAGCCCCTGGCGGTGGCTGGGGCCAGCCGCTGGGCGAGCGCGCGGGCAGC
AGCGGAGCCGGAGAGAGCGAGGGCCATCGGATCTGTCTGTGTCGGACGATCGGACGGCTGGAGGGCTCCGGCTCTGTGCTGCTGCTACTGCTCCAACGTG
GGCGTTTGAG
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