Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1  (registered. 2012)
Contig Information
Length 858 bp
Clones alternative view 121 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 7
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 2
Wh_h Spike at heading date 8
Wh_r Root 3
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 1
Wh_EM Dormant seed with water absorption 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 10
Wh_OKCS Seed DPA5 7
Wh_PCDAM Anther at meiosis 4
Wh_SHDr Shoot grown with dessication 2
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_CA 2
WH_SP 6
WH_XB Root 4
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XE Seedling, infected with leaf rust 6
WH_XF Seedling, infected with leaf rust 6
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1352427|sp|P47815.2|IF1A_WHEAT|IF1A_WHEAT RecName: Full=Eukaryotic translation initiation factor 1A;
Score 298
Evalue 5.00E-79
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1
TTTTTTTTTTAGTGAAGTAGAGTCGTGCCAATCTCAGGAAGTTTCCCAAATTACGGCAAAGCAATCAAGGAGAACAAATCAATATCAACAGCATAATAAT
CATCAGATGGCTTGTTGCAAAGCATAATAATACGACGAACACTATAATCCGACAATTATTTAAGCACCTCAAATCACAACGATTTCTCGTTACCAAATCC
ATCAATCCACAACAGCCCACCGACCGACCGACACAGACAGACACGGACGCTATTAGAACAGAATAGAACACAAAGTATATCGAGCGAGGGAGGAGGAGGG
GAAAAAAGCTTAGATCTTGTCGATGTCCTCGTCCTCGAACTGGATGTAGTCGCTGTCGCCCTCGCCCTCCTCGGGGCCGTCGACGTCGACGCCCTCGTTG
AGGCGGAGCGTGTCGGGGAGCTCCCCGTAGGCCTTGAGCAGGCGGGCCTCGTCGTTCATGTACTTGAGGATGACGTCGGCCTTGTCGTCCTGGTAGTCGC
GGAGGCCGACGAGGACGATGTCCCCGGCGGCGATCCAGACCTTCTTGTGCATCTTGCCCCGGATGTGGCAGAGGCGCTTGGTGCCGTCGACGCAGATGGC
CTCGCAGCGCCCGTTGCCGAGCATCCGCGTCACCTGCGCGTACTCCTGCCCGTCCTCCTTGAACACCAGCTCGCGCTTGTCGTCGTCGGCCTCGTTCTTG
CCCCTCTTGCGGTTCTTGCCTCCCTTACCCTTGTTCTTCGGCATGGCTGGCTGGCTGGGGTGGGGCTGGCTCTGGCTTGGGTCGCGGCGACGGAGCTGGA
CGAAACCCTCGGCTTTAGATCGAGATGGGGAGCGGTGGTGGTGCGGTCTGCCTCGTGC
page-top