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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5683  (registered. 2012)
Contig Information
Length 1302 bp
Clones alternative view 104 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 4
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 2
Wh_OKCS Seed DPA5 2
Wh_RDr Root of dessiccated seed 5
Wh_SHDr Shoot grown with dessication 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 6
WH_XR Roots, 18 day old plants were grown hydroponically 13
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 10
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 2
WH_XB Root 7
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XE Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 8
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|4099406|gb|AAD10494.1|| gamma-type tonoplast intrinsic protein [Triticum aestivum]
Score 498
Evalue 7.00E-139
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5683 
TATCAGAACATCACACACTTTAAGAAACAATGAGTCTATAACCTAATAAATACATTGTTGCATGTTCCTATCTACTGTGGAGATAGTAACATAGTCTAGA
AAAGTGGTGTGTAAGTTACTAGACTATGTTCTTGCCCATTATGACCTGCCTCAAACAAACTAAACAGTAGTGGACCTCACTGGCAATCTCAGACGGACGG
ATTAATTCCAGAATTCAAGTTTTCAGAGGCACGGTCGAACTCAACTCAACTTGAAATTACTCGGGCGGGACGGGCGAATTCACAGTTTTACAGAAGCAAA
TTGACAGTGTCGTCCACGGTTTTACAGCTCCACGAACTCACCACAAACTGATCGACCCAGGAAGCAAACTTAAACGACTCATGGTGATGGCAAGGAAGGA
GACGACGCGATCATAGATCACACGGACGGACGGGCAGGCAGGCGGCGGGCTTGCACGCAAGCAAGCAGGCTGGCTGCGCTGAGCTCGCTGCTCAGTAGTC
GGTGGTGGGGAGCTGCTCGTGGGTGCGGGAGATGAAGAGCAGCTCGTAGATGACGCCGGCGAGGCCGCCGCCGATGAGGGGGCCGACCCAGTACACCCAC
TGGTACCCCCACTCCCAGCTGACGAGGGCGGGGCCGAAGGAGACGGCGGGGTTCATGGACGCGCCGGAGAAGGCGCCGCCCACCAGGATGTTGGCGCCCA
CGATGAAGCCGATGGCGATGGGCGCGATGGTGCCCAGGCTGCCCTTCTTGGGGTCCACGGCCGTGGCGTACACCGTGTACACCAGCCCGAAGGTCATCAC
GATCTCCAGCACCACCGCCTCCCACGCGCCGATGCCACTCAGCCCGAAGGTGCCGGTGGGGAGCCCGCCGGTGGAGAAGCGGAGGAGGAAGCAGGCGGCG
GTGGAGCCCAGCAGCTGCGCGATCCAGTAGAGCAGGCCGCGGAAGAGGGTGATGTTGCCGCCCACGAAGGCGCCGAAGGTCACGGCCGGGTTCACGTGCC
CGCCGGAGATGTTGGCGCCCACGGACACCGCCACGAACAGCGCGAAGGCGTGGGCTATCGCCGCCGAGATGAGGCCGGCGGGGGTCGCCGCGCCGTCGGG
GCTCAGCTTGCTGAAGGCCATGCCGGAGCCCTGGCCGGCGAAGACGAAGATGAGCGTGGAGATGAACTCGGCGAGCGCCGCCTTGAGGGCGCCCACCTCG
TACACCTCACGGTGGCTCCCCACGGCGATCCTGCTGACCGGCATTTTCGCTCACCTCCGAGCCTAGCTCGCTCGCTCGCTGGAGAAGAAGAAGAAGAGAC
TG
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