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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24933  (registered. 2003)
Contig Information
Length 1930 bp
Clones 47 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 1
Wh_EMC Dormant seed with cold treatment after water absorption 3
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 5
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VABA Shoot with ABA treatment 16
Wh_VWD Shoot grown with dessication 15
Homology (BLAST) Top Hit Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|15408889|dbj|BAB64280.1| putative delta-1-pyrroline-5-carboxylate synthetase [Oryza sativa Japonica Group] >gi|113534333|dbj|BAF06716.1| Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|215715215|dbj|BAG94966.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218189375|gb|EEC71802.1| hypothetical protein OsI_04432 [Oryza sativa Indica Group]
Score 1150
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24933 
CCGATACATTCATTTCAGGTGCTCTTTGCCATAGAAAGACAACATGACAACGGATTCGAGAATTCATCAGAAACAGTACAGCTACTTCATATATGTAGCA
TAGATGTACCGATGCAATTCTACAGTTACAACAGCTAGTGCCATAACTACGACATTGTATGGATAAATCATTGTACACGAATAATCACGGAACTAGATAG
CGACATAGTAACAACAATGCTCTCTTGTCTTTCTTCATTCCTCGCACAGAGAGAAGGGGGCTTTGAAGAGGATTATTCTATAAAAATTGCTCTACAGCAG
GAATCCTCTACCCTCATTGCAAAGGAAGATCCTTGTGGGTGTACACAACTCCCTTGTCACCGTTCACTACTTGTCCACTCCCTCGCAGAATGCACCGAGT
GGTTAAAAGACCGTCGACGCCAACAGGTCCACGGGCATGTATGCGCCCTGTACTTATGCCAACCTCTGCACCTAGACCAAAGCGAGTCCCATCACAGAAC
CTTGTGCTTGCATTATGGAACACAGCAGCACTGTCAACTTGTTGTAGAAAAGTATCCGCTGACTTCTTATCAGTTGTGATAATACAATCTGTGTGTGCAC
TTCCATAACGATTTATATGGTCAATCGCTGACTGCACATCATCAACAAATTCGAGGGTGCATGCCATTGAGCTATACTCATGATGAAATGAATCTACCTT
CGGTACTTTCAATGTGTCATGTGCGACAGGCCCACCATAAATAACAACTCCTTCTTTCGCAAGTTCCATCAATAAATCATCAAGACCCTCTGTCTTGTTC
AGATCTTTATGAACAAGCAGTGTTTCCATAGCATTACACGCTGCAGGATAATCAACCTTTGCATCCAATACTATACGTTTTGCCATGTCCATGTCAGCTG
ATTTATCAATATAAACATGGCAGATACCATCAGCATGACCCAGAACGGGAATCTTGGTTTGTGCTTTGATTTGAGAAACAAGCCTGTTACTGCCTCTTGG
AATAACAAGATCAATCACATCGTCAAGCTTTAGAAGATCAGCAATTTCATCTTTGCTTTTCACAAGGGCCAATAAGCTTTTTACCAACAGCATCTGGAAT
CACACTGGTTATGACCTTATGTAATATTGTGTTTGATCTCATAGCTTCTTTTCCTCCTTTCAGAAGAAGGCCATTTCCACTTCGGATTGCTAGAGCTGCA
ATCTGGACCAGGGCATCAGGACGAGACTCAAAAATAATTAGAAGAACACCTAATGGGCAGTACATCTTCTCGAAAACTAAATCCTTGGCAACCTCTGTTT
TTTTCAGTGTATGTGAGATAGGGTCCTCCATGTCCGCAATTGCACGAATCGATTCAGCAAGGCTTGTTATCTTTCCAGCCTTCAGGGTCATCCTAGCAAC
CAAGGATTTCTCGTAACCTGAATCTTGTGCCGCAGCTAGATCAGCTTCATTCTCGGATATAATTAAATCCACATTTGCATCCAGAGCACCGGCAATATCT
AGCAAAATCTTCTTACGCTCCTCCGATGACAAATTCTGGAGATGCCGTGAGCAATCTTTTGCAGCAACTGCCATCTCACGGGTTGTCACCTCCTTTGAAC
AATCCCAGACATTTGCTTCATTATGGAAAAGTGTACCAATTTTCTCTCCTCGCATAATCTTAATAATGCTATCTGTTACAAATCCACTTGCAATTACAGC
AGGTACGCCCTTTGATGCAGCAGTAACAGCAGCTGCCACCTTAGCTTGCATTCCACCTCTTCCCACACGAGACTTCTCCCCAAAATTAATTAGCTTCCCG
TGTTTTTCATTAATGTAGGTGTGGATAATCTTTGATTGGGGATCGCTCGGTGGACCACTATAGAGTCCCTCCACATCACTAAGCATGATAAGAAGATCAG
CATCCAGTTCTTTCGCCAACAGCGTGCCAA
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