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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15320  (registered. 2012)
Contig Information
Length 864 bp
Clones alternative view 9 Clones [Download: TSV  ,  FASTA ]
Wh_r Root 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XD Root, treated at 50 microM Al for 6h 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218189274|gb|EEC71701.1|| hypothetical protein OsI_04204 [Oryza sativa Indica Group]
Score 239
Evalue 4.00E-61
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig15320 
TCAATGCATGATGTCACTGGCAGTAAGTATTTACATCACGAAAATTTTAGAAGCCACACCAGCACTCAAGTGTACTCCTAACCGCATAGTACTGATCAAT
ACAGTTAATTCATAACACTCAATTGTATTGCTATACAACACAGGAAAACTCAACCGGCACCAAAAAAATGTGTCAAAATACTAATTAGGCCCTCAACAGG
CAAGCTACAAGCAAAACCTCTGACTAGCTTCTCTACAACTACACCAGAAACTCTTCAAGAATGGGTTGACCAGGAACGGGGGTTACAAAATGTCGGCCCC
GCATCATGTAGTGCATCCGACATACCTATCTACAAATAGCATGACTATGCTGCAAATTTACAGTCAATTACAATGGTAGGTATTTCTCATAGTACTGTCA
ACTATATTTAGAGTGGTTCCATAGAGCCACTCTTTAACCTCTCCATTCGTGCTTGCAGCCCAGATAATGCTCTCTCGTCCATGGGTGGAATATTACTTTG
TGTTTGTGGCTCACCATCCACTCGCGCCCCCCCATGGAGCGCATTGCCATTCATACTTGACAGTGGCCGAGTCTGAGCTACATCGAAATTGCCCCCCACA
GCTGCGGCTTGGATGCTCTTCATCCTTTCCCTGAGAGCATCCAATGTCCCTGCTGAGGATTGGAATCTATCTGTCTGTTGATCTGATTGTAACCTCAAAT
CAGAGTCTCCTTGGACTCTGAAGGCGTCGTCTTCATTACAATCCGTTTTGCTACTTATCGATTTTGTATGAACAGGAGAAGGTGCAAACTTTGGAGAGGG
TATTGATGCTATTGGAGGTGGAGTTGATAATGGAAGACTAGAGGGTGTTCTGCCAGCTGCAGCA
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