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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7091  (registered. 2012)
Contig Information
Length 1441 bp
Clones alternative view 49 Clones [Download: TSV  ,  FASTA ]
Wh_e Seed DPA10 2
Wh_oh Pistil at heading date 3
Wh_r Root 2
Wh_DPA20 Seed DPA20 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_VABA Shoot with ABA treatment 2
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XA Root 2
WH_XB Root 2
WH_XE Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 7
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115447475|ref|NP_001047517.1|| Os02g0635000 [Oryza sativa (japonica cultivar-group)]
Score 605
Evalue 4.00E-171
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7091 
TCGGCACATGGGCTGGTGCTCCCCATCCGCTCCCCGGCAGCTGCTATCCACCGTCGCACTCTTTGCCTTCGGCGCGGGGCTCCTCACCTACGGCGCTCAC
CTCTCCTACGTCCACATCGAGCCCCAGCGCGCGCGCACGCTCGCCCGCGATCAATTCGTCCGCGACTACCTACGCAGGAAGCACGACAAGTAAGCCCGCA
CCCCCCACGGCATCCCCCTCCCAGTCCGCTCGATCTCTCGCCGTTCCTGCTCGTCGGCGATGGCTTTGTCCCCCGCGAGCGTCGGGCCGGTGATTTCGGA
GGTGGAGATGAACGCCGGCGCCGATCAGGGTGCCACTACCGTGCGGGCCACTGTCGTGCAGGCCTGCAGCGTGTTCTACGACACCCCTGCAACGCTCGAT
AAAGCAGAGAAATTGATAGCGGAGGCTGCTGGATATGGTTCACAGTTGGTTCTTTTTCCAGAAGTCTTTGTTGGTGGCTACCCTCATGGGTCTACCTTTG
GACTGACTATTGGCAGTCGATCTGCCAAAGGAAAAGAAGACTTTCGGAAGTATCATGCGGCTGCCATAGATGTGCCTGGCCCAGAGGTTAGCCGCTTAGC
TGCATTGGCCGGAAAATACAATGTCTTCTTGGTGATTGGGGTTGTTGAAAGGGCAGGCTACACACTCTACAATACAGTGCTCTCCTTTGATTCTCTGGGA
AAGTACCTAGGAAAGCACCGCAAGCTCATGCCTACCGCACTGGAACGAGTATTCTGGGGGTGTGGAGATGGATCTACCATACCTGTTTATGATACTCCAC
TTGGAAAGGTAGGTGCCGTCATCTGCTGGGAGAACAGAATGCCACTTATCAGGACAGCGATGTATGCCAAAGGTGTTGAAATATATTGTGCTCCCACTGC
GGATGCGCTGCCAAGTTGGCAATCTTCCATGACACATATTGCGCTTGAAGGGGGATGCTTTGTTCTGACAGCAAACCAGTTCTGCCGCAGAAAAGACTTT
CCTCCCCCGCCTGAGTATACCTTTGGTGGCCATGAGGAGGAGCCATCCCCAGAAACCGCTGTTTGTCCTGGAGGGAGCGCCATCATTTCGCCATCCGGGA
CAGTGTTGGCAGGTCCCAACTATGAAGGCGAGGCCCTCCTCACAGCTGACCTGGACCTTGGAGAAATTGTTCGAGCCAAGTTTGATTTCGACGTCGTGGG
ACACTACGCGCGCCCTGAGGTGCTGAGCTTGACTGTGAAGACCGAACCGAAGCACGCCGTGTCTTTCACCTCTACTGTGGGATAAGATTCGAGGCGCAAA
GAGGGACGATAGTTTGAAGACCTGATGTCCAGTAGTCTTCCGTAGTCGTGTATAACAAAGTTCTCGTCCAACGTCTTTGTCGGCATTACAACAATAATTG
TGGCTTCATATATTTCTTGTAAAGATTCTCTACTGGTTTGC
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